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SNORA11F (small nucleolar RNA, H/ACA box 11F)

Identity

Other alias-
HGNC (Hugo) SNORA11F
LocusID (NCBI) 109617000
Atlas_Id 79497
Location 10q22.2  [Link to chromosome band 10q22]
Location_base_pair Starts at 73126080 and ends at 73126207 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SNORA11F   52189
Cards
Entrez_Gene (NCBI)SNORA11F  109617000  small nucleolar RNA, H/ACA box 11F
Aliases
GeneCards (Weizmann)SNORA11F
Ensembl hg19 (Hinxton)ENSG00000221164 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000221164 [Gene_View]  chr10:73126080-73126207 [Contig_View]  SNORA11F [Vega]
ICGC DataPortalENSG00000221164
TCGA cBioPortalSNORA11F
AceView (NCBI)SNORA11F
Genatlas (Paris)SNORA11F
WikiGenes109617000
SOURCE (Princeton)SNORA11F
Genetics Home Reference (NIH)SNORA11F
Genomic and cartography
GoldenPath hg38 (UCSC)SNORA11F  -     chr10:73126080-73126207 -  10q22.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SNORA11F  -     10q22.2   [Description]    (hg19-Feb_2009)
EnsemblSNORA11F - 10q22.2 [CytoView hg19]  SNORA11F - 10q22.2 [CytoView hg38]
Mapping of homologs : NCBISNORA11F [Mapview hg19]  SNORA11F [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SNORA11F
Alternative Splicing GalleryENSG00000221164
Gene ExpressionSNORA11F [ NCBI-GEO ]   SNORA11F [ EBI - ARRAY_EXPRESS ]   SNORA11F [ SEEK ]   SNORA11F [ MEM ]
Gene Expression Viewer (FireBrowse)SNORA11F [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)109617000
GTEX Portal (Tissue expression)SNORA11F
Human Protein AtlasENSG00000221164-SNORA11F [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORA11F
DMDM Disease mutations109617000
Blocks (Seattle)SNORA11F
Human Protein Atlas [tissue]ENSG00000221164-SNORA11F [tissue]
Protein Interaction databases
FunCoupENSG00000221164
BioGRIDSNORA11F
STRING (EMBL)SNORA11F
ZODIACSNORA11F
Ontologies - Pathways
Huge Navigator SNORA11F [HugePedia]
snp3D : Map Gene to Disease109617000
BioCentury BCIQSNORA11F
ClinGenSNORA11F
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD109617000
Clinical trialSNORA11F
Miscellaneous
canSAR (ICR)SNORA11F (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNORA11F
EVEXSNORA11F
GoPubMedSNORA11F
iHOPSNORA11F
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:22:35 CET 2017

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