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SNORA17A (small nucleolar RNA, H/ACA box 17A)

Identity

Alias_namesSNORA17
small nucleolar RNA, H/ACA box 17
Alias_symbol (synonym)ACA17
Other alias
HGNC (Hugo) SNORA17A
LocusID (NCBI) 677804
Atlas_Id 77982
Location 9q34.3  [Link to chromosome band 9q34]
Location_base_pair Starts at 136726747 and ends at 136726879 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SNORA17A   32607
Cards
Entrez_Gene (NCBI)SNORA17A  677804  small nucleolar RNA, H/ACA box 17A
AliasesACA17; SNORA17
GeneCards (Weizmann)SNORA17A
Ensembl hg19 (Hinxton)ENSG00000274998 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000274998 [Gene_View]  chr9:136726747-136726879 [Contig_View]  SNORA17A [Vega]
ICGC DataPortalENSG00000274998
TCGA cBioPortalSNORA17A
AceView (NCBI)SNORA17A
Genatlas (Paris)SNORA17A
WikiGenes677804
SOURCE (Princeton)SNORA17A
Genetics Home Reference (NIH)SNORA17A
Genomic and cartography
GoldenPath hg38 (UCSC)SNORA17A  -     chr9:136726747-136726879 -  9q34.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SNORA17A  -     9q34.3   [Description]    (hg19-Feb_2009)
EnsemblSNORA17A - 9q34.3 [CytoView hg19]  SNORA17A - 9q34.3 [CytoView hg38]
Mapping of homologs : NCBISNORA17A [Mapview hg19]  SNORA17A [Mapview hg38]
Gene and transcription
Genbank (Entrez)AJ609434
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SNORA17A
Cluster EST : UnigeneHs.495480 [ NCBI ]
CGAP (NCI)Hs.495480
Alternative Splicing GalleryENSG00000274998
Gene ExpressionSNORA17A [ NCBI-GEO ]   SNORA17A [ EBI - ARRAY_EXPRESS ]   SNORA17A [ SEEK ]   SNORA17A [ MEM ]
Gene Expression Viewer (FireBrowse)SNORA17A [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)677804
GTEX Portal (Tissue expression)SNORA17A
Human Protein AtlasENSG00000274998-SNORA17A [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORA17A
DMDM Disease mutations677804
Blocks (Seattle)SNORA17A
Human Protein Atlas [tissue]ENSG00000274998-SNORA17A [tissue]
Protein Interaction databases
FunCoupENSG00000274998
BioGRIDSNORA17A
STRING (EMBL)SNORA17A
ZODIACSNORA17A
Ontologies - Pathways
Huge Navigator SNORA17A [HugePedia]
snp3D : Map Gene to Disease677804
BioCentury BCIQSNORA17A
ClinGenSNORA17A
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD677804
Chemical/Pharm GKB GenePA144596341
Clinical trialSNORA17A
Miscellaneous
canSAR (ICR)SNORA17A (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNORA17A
EVEXSNORA17A
GoPubMedSNORA17A
iHOPSNORA17A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 13:20:41 CET 2017

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