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SNORA20 (small nucleolar RNA, H/ACA box 20)

Identity

Alias_symbol (synonym)ACA20
Other alias
HGNC (Hugo) SNORA20
LocusID (NCBI) 677806
Atlas_Id 73672
Location 6q25.3  [Link to chromosome band 6q25]
Location_base_pair Starts at 159780250 and ends at 159780381 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SNORA20   32610
Cards
Entrez_Gene (NCBI)SNORA20  677806  small nucleolar RNA, H/ACA box 20
AliasesACA20
GeneCards (Weizmann)SNORA20
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr6:159780250-159780381 [Contig_View]  SNORA20 [Vega]
TCGA cBioPortalSNORA20
AceView (NCBI)SNORA20
Genatlas (Paris)SNORA20
WikiGenes677806
SOURCE (Princeton)SNORA20
Genetics Home Reference (NIH)SNORA20
Genomic and cartography
GoldenPath hg38 (UCSC)SNORA20  -     chr6:159780250-159780381 -  6q25.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SNORA20  -     6q25.3   [Description]    (hg19-Feb_2009)
EnsemblSNORA20 - 6q25.3 [CytoView hg19]  SNORA20 - 6q25.3 [CytoView hg38]
Mapping of homologs : NCBISNORA20 [Mapview hg19]  SNORA20 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AJ609459
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SNORA20
Cluster EST : UnigeneHs.689705 [ NCBI ]
CGAP (NCI)Hs.689705
Gene ExpressionSNORA20 [ NCBI-GEO ]   SNORA20 [ EBI - ARRAY_EXPRESS ]   SNORA20 [ SEEK ]   SNORA20 [ MEM ]
Gene Expression Viewer (FireBrowse)SNORA20 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)677806
GTEX Portal (Tissue expression)SNORA20
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORA20
DMDM Disease mutations677806
Blocks (Seattle)SNORA20
Protein Interaction databases
BioGRIDSNORA20
STRING (EMBL)SNORA20
ZODIACSNORA20
Ontologies - Pathways
Huge Navigator SNORA20 [HugePedia]
snp3D : Map Gene to Disease677806
BioCentury BCIQSNORA20
ClinGenSNORA20
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD677806
Chemical/Pharm GKB GenePA144596344
Clinical trialSNORA20
Miscellaneous
canSAR (ICR)SNORA20 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNORA20
EVEXSNORA20
GoPubMedSNORA20
iHOPSNORA20
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 14:30:33 CEST 2018

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