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SNORA25B (small nucleolar RNA, H/ACA box 25B)

Identity

Other alias-
HGNC (Hugo) SNORA25B
LocusID (NCBI) 109623459
Atlas_Id 79730
Location 7q31.2  [Link to chromosome band 7q31]
Location_base_pair Starts at 115581315 and ends at 115581441 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SNORA25B   52199
Cards
Entrez_Gene (NCBI)SNORA25B  109623459  small nucleolar RNA, H/ACA box 25B
Aliases
GeneCards (Weizmann)SNORA25B
Ensembl hg19 (Hinxton)ENSG00000202377 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000202377 [Gene_View]  chr7:115581315-115581441 [Contig_View]  SNORA25B [Vega]
ICGC DataPortalENSG00000202377
TCGA cBioPortalSNORA25B
AceView (NCBI)SNORA25B
Genatlas (Paris)SNORA25B
WikiGenes109623459
SOURCE (Princeton)SNORA25B
Genetics Home Reference (NIH)SNORA25B
Genomic and cartography
GoldenPath hg38 (UCSC)SNORA25B  -     chr7:115581315-115581441 -  7q31.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SNORA25B  -     7q31.2   [Description]    (hg19-Feb_2009)
EnsemblSNORA25B - 7q31.2 [CytoView hg19]  SNORA25B - 7q31.2 [CytoView hg38]
Mapping of homologs : NCBISNORA25B [Mapview hg19]  SNORA25B [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SNORA25B
Alternative Splicing GalleryENSG00000202377
Gene ExpressionSNORA25B [ NCBI-GEO ]   SNORA25B [ EBI - ARRAY_EXPRESS ]   SNORA25B [ SEEK ]   SNORA25B [ MEM ]
Gene Expression Viewer (FireBrowse)SNORA25B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)109623459
GTEX Portal (Tissue expression)SNORA25B
Human Protein AtlasENSG00000202377-SNORA25B [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORA25B
DMDM Disease mutations109623459
Blocks (Seattle)SNORA25B
Human Protein Atlas [tissue]ENSG00000202377-SNORA25B [tissue]
Protein Interaction databases
FunCoupENSG00000202377
BioGRIDSNORA25B
STRING (EMBL)SNORA25B
ZODIACSNORA25B
Ontologies - Pathways
Huge Navigator SNORA25B [HugePedia]
snp3D : Map Gene to Disease109623459
BioCentury BCIQSNORA25B
ClinGenSNORA25B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD109623459
Clinical trialSNORA25B
Miscellaneous
canSAR (ICR)SNORA25B (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNORA25B
EVEXSNORA25B
GoPubMedSNORA25B
iHOPSNORA25B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:17:13 CET 2017

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