Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

SNORA38B (small nucleolar RNA, H/ACA box 38B)

Identity

Alias_namessmall nucleolar RNA, H/ACA box 38B (retrotransposed)
Other alias-
HGNC (Hugo) SNORA38B
LocusID (NCBI) 100124536
Atlas_Id 73695
Location 17q24.2  [Link to chromosome band 17q24]
Location_base_pair Starts at 67740670 and ends at 67740801 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SNORA38B   33617
Cards
Entrez_Gene (NCBI)SNORA38B  100124536  small nucleolar RNA, H/ACA box 38B
Aliases
GeneCards (Weizmann)SNORA38B
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr17:67740670-67740801 [Contig_View]  SNORA38B [Vega]
TCGA cBioPortalSNORA38B
AceView (NCBI)SNORA38B
Genatlas (Paris)SNORA38B
WikiGenes100124536
SOURCE (Princeton)SNORA38B
Genetics Home Reference (NIH)SNORA38B
Genomic and cartography
GoldenPath hg38 (UCSC)SNORA38B  -     chr17:67740670-67740801 +  17q24.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SNORA38B  -     17q24.2   [Description]    (hg19-Feb_2009)
EnsemblSNORA38B - 17q24.2 [CytoView hg19]  SNORA38B - 17q24.2 [CytoView hg38]
Mapping of homologs : NCBISNORA38B [Mapview hg19]  SNORA38B [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SNORA38B
Cluster EST : UnigeneHs.693446 [ NCBI ]
CGAP (NCI)Hs.693446
Gene ExpressionSNORA38B [ NCBI-GEO ]   SNORA38B [ EBI - ARRAY_EXPRESS ]   SNORA38B [ SEEK ]   SNORA38B [ MEM ]
Gene Expression Viewer (FireBrowse)SNORA38B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100124536
GTEX Portal (Tissue expression)SNORA38B
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORA38B
DMDM Disease mutations100124536
Blocks (Seattle)SNORA38B
Protein Interaction databases
BioGRIDSNORA38B
STRING (EMBL)SNORA38B
ZODIACSNORA38B
Ontologies - Pathways
Huge Navigator SNORA38B [HugePedia]
snp3D : Map Gene to Disease100124536
BioCentury BCIQSNORA38B
ClinGenSNORA38B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100124536
Chemical/Pharm GKB GenePA162404156
Clinical trialSNORA38B
Miscellaneous
canSAR (ICR)SNORA38B (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNORA38B
EVEXSNORA38B
GoPubMedSNORA38B
iHOPSNORA38B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:38:56 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.