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SNORA47 (small nucleolar RNA, H/ACA box 47)

Identity

Alias_symbol (synonym)HBI-115
Other alias
HGNC (Hugo) SNORA47
LocusID (NCBI) 677828
Atlas_Id 73704
Location 5q13.3  [Link to chromosome band 5q13]
Location_base_pair Starts at 77080434 and ends at 77080571 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SNORA47   32640
Cards
Entrez_Gene (NCBI)SNORA47  677828  small nucleolar RNA, H/ACA box 47
AliasesHBI-115
GeneCards (Weizmann)SNORA47
Ensembl hg19 (Hinxton)ENSG00000238961 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000238961 [Gene_View]  chr5:77080434-77080571 [Contig_View]  SNORA47 [Vega]
ICGC DataPortalENSG00000238961
TCGA cBioPortalSNORA47
AceView (NCBI)SNORA47
Genatlas (Paris)SNORA47
WikiGenes677828
SOURCE (Princeton)SNORA47
Genetics Home Reference (NIH)SNORA47
Genomic and cartography
GoldenPath hg38 (UCSC)SNORA47  -     chr5:77080434-77080571 -  5q13.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SNORA47  -     5q13.3   [Description]    (hg19-Feb_2009)
EnsemblSNORA47 - 5q13.3 [CytoView hg19]  SNORA47 - 5q13.3 [CytoView hg38]
Mapping of homologs : NCBISNORA47 [Mapview hg19]  SNORA47 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SNORA47
Cluster EST : UnigeneHs.693249 [ NCBI ]
CGAP (NCI)Hs.693249
Alternative Splicing GalleryENSG00000238961
Gene ExpressionSNORA47 [ NCBI-GEO ]   SNORA47 [ EBI - ARRAY_EXPRESS ]   SNORA47 [ SEEK ]   SNORA47 [ MEM ]
Gene Expression Viewer (FireBrowse)SNORA47 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)677828
GTEX Portal (Tissue expression)SNORA47
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORA47
DMDM Disease mutations677828
Blocks (Seattle)SNORA47
Human Protein AtlasENSG00000238961
Protein Interaction databases
FunCoupENSG00000238961
BioGRIDSNORA47
STRING (EMBL)SNORA47
ZODIACSNORA47
Ontologies - Pathways
Huge Navigator SNORA47 [HugePedia]
snp3D : Map Gene to Disease677828
BioCentury BCIQSNORA47
ClinGenSNORA47
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD677828
Chemical/Pharm GKB GenePA144596324
Clinical trialSNORA47
Miscellaneous
canSAR (ICR)SNORA47 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNORA47
EVEXSNORA47
GoPubMedSNORA47
iHOPSNORA47
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:38:58 CEST 2017

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