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SNORA48 (small nucleolar RNA, H/ACA box 48)

Identity

Alias (NCBI)ACA48
SNORA48A
HGNC (Hugo) SNORA48
HGNC Alias symbACA48
SNORA48A
LocusID (NCBI) 652965
Atlas_Id 73705
Location 17p13.1  [Link to chromosome band 17p13]
Location_base_pair Starts at 7574713 and ends at 7574847 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SNORA48   32641
Cards
Entrez_Gene (NCBI)SNORA48  652965  small nucleolar RNA, H/ACA box 48
AliasesACA48; SNORA48A
GeneCards (Weizmann)SNORA48
Ensembl hg19 (Hinxton)ENSG00000209582 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000209582 [Gene_View]  ENSG00000209582 [Sequence]  chr17:7574713-7574847 [Contig_View]  SNORA48 [Vega]
ICGC DataPortalENSG00000209582
TCGA cBioPortalSNORA48
AceView (NCBI)SNORA48
Genatlas (Paris)SNORA48
WikiGenes652965
SOURCE (Princeton)SNORA48
Genetics Home Reference (NIH)SNORA48
Genomic and cartography
GoldenPath hg38 (UCSC)SNORA48  -     chr17:7574713-7574847 +  17p13.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SNORA48  -     17p13.1   [Description]    (hg19-Feb_2009)
GoldenPathSNORA48 - 17p13.1 [CytoView hg19]  SNORA48 - 17p13.1 [CytoView hg38]
ImmunoBaseENSG00000209582
genome Data Viewer NCBISNORA48 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AJ609447
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SNORA48
Alternative Splicing GalleryENSG00000209582
Gene ExpressionSNORA48 [ NCBI-GEO ]   SNORA48 [ EBI - ARRAY_EXPRESS ]   SNORA48 [ SEEK ]   SNORA48 [ MEM ]
Gene Expression Viewer (FireBrowse)SNORA48 [ Firebrowse - Broad ]
GenevisibleExpression of SNORA48 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)652965
GTEX Portal (Tissue expression)SNORA48
Human Protein AtlasENSG00000209582-SNORA48 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORA48
DMDM Disease mutations652965
Blocks (Seattle)SNORA48
Human Protein Atlas [tissue]ENSG00000209582-SNORA48 [tissue]
Protein Interaction databases
FunCoupENSG00000209582
BioGRIDSNORA48
STRING (EMBL)SNORA48
ZODIACSNORA48
Ontologies - Pathways
Huge Navigator SNORA48 [HugePedia]
snp3D : Map Gene to Disease652965
BioCentury BCIQSNORA48
ClinGenSNORA48
Clinical trials, drugs, therapy
Protein Interactions : CTD652965
Pharm GKB GenePA144596325
Clinical trialSNORA48
Miscellaneous
canSAR (ICR)SNORA48 (select the gene name)
HarmonizomeSNORA48
DataMed IndexSNORA48
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNORA48
EVEXSNORA48
GoPubMedSNORA48
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Jul 16 16:29:19 CEST 2020

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