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SNORA50A (small nucleolar RNA, H/ACA box 50A)

Identity

Alias_namesSNORA50
SNORA76A
small nucleolar RNA, H/ACA box 50
small nucleolar RNA, H/ACA box 76A
Alias_symbol (synonym)ACA50
Other alias
HGNC (Hugo) SNORA50A
LocusID (NCBI) 677830
Atlas_Id 77987
Location 16q21  [Link to chromosome band 16q21]
Location_base_pair Starts at 58559796 and ends at 58559931 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SNORA50A   32643
Cards
Entrez_Gene (NCBI)SNORA50A  677830  small nucleolar RNA, H/ACA box 50A
AliasesACA50; SNORA50; SNORA76A
GeneCards (Weizmann)SNORA50A
Ensembl hg19 (Hinxton)ENSG00000206952 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000206952 [Gene_View]  chr16:58559796-58559931 [Contig_View]  SNORA50A [Vega]
ICGC DataPortalENSG00000206952
TCGA cBioPortalSNORA50A
AceView (NCBI)SNORA50A
Genatlas (Paris)SNORA50A
WikiGenes677830
SOURCE (Princeton)SNORA50A
Genetics Home Reference (NIH)SNORA50A
Genomic and cartography
GoldenPath hg38 (UCSC)SNORA50A  -     chr16:58559796-58559931 -  16q21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SNORA50A  -     16q21   [Description]    (hg19-Feb_2009)
EnsemblSNORA50A - 16q21 [CytoView hg19]  SNORA50A - 16q21 [CytoView hg38]
Mapping of homologs : NCBISNORA50A [Mapview hg19]  SNORA50A [Mapview hg38]
Gene and transcription
Genbank (Entrez)AJ609468
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SNORA50A
Cluster EST : UnigeneHs.677515 [ NCBI ]
CGAP (NCI)Hs.677515
Alternative Splicing GalleryENSG00000206952
Gene ExpressionSNORA50A [ NCBI-GEO ]   SNORA50A [ EBI - ARRAY_EXPRESS ]   SNORA50A [ SEEK ]   SNORA50A [ MEM ]
Gene Expression Viewer (FireBrowse)SNORA50A [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)677830
GTEX Portal (Tissue expression)SNORA50A
Human Protein AtlasENSG00000206952-SNORA50A [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORA50A
DMDM Disease mutations677830
Blocks (Seattle)SNORA50A
Human Protein Atlas [tissue]ENSG00000206952-SNORA50A [tissue]
Protein Interaction databases
FunCoupENSG00000206952
BioGRIDSNORA50A
STRING (EMBL)SNORA50A
ZODIACSNORA50A
Ontologies - Pathways
Huge Navigator SNORA50A [HugePedia]
snp3D : Map Gene to Disease677830
BioCentury BCIQSNORA50A
ClinGenSNORA50A
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD677830
Chemical/Pharm GKB GenePA144596289
Clinical trialSNORA50A
Miscellaneous
canSAR (ICR)SNORA50A (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNORA50A
EVEXSNORA50A
GoPubMedSNORA50A
iHOPSNORA50A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Nov 9 12:28:45 CET 2017

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