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SNORA52 (small nucleolar RNA, H/ACA box 52)

Identity

Alias (NCBI)ACA52
HGNC (Hugo) SNORA52
HGNC Alias symbACA52
LocusID (NCBI) 619565
Atlas_Id 73708
Location 11p15.5  [Link to chromosome band 11p15]
Location_base_pair Starts at 811681 and ends at 811814 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SNORA52   32645
Cards
Entrez_Gene (NCBI)SNORA52  619565  small nucleolar RNA, H/ACA box 52
AliasesACA52
GeneCards (Weizmann)SNORA52
Ensembl hg19 (Hinxton)ENSG00000199785 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000199785 [Gene_View]  ENSG00000199785 [Sequence]  chr11:811681-811814 [Contig_View]  SNORA52 [Vega]
ICGC DataPortalENSG00000199785
TCGA cBioPortalSNORA52
AceView (NCBI)SNORA52
Genatlas (Paris)SNORA52
WikiGenes619565
SOURCE (Princeton)SNORA52
Genetics Home Reference (NIH)SNORA52
Genomic and cartography
GoldenPath hg38 (UCSC)SNORA52  -     chr11:811681-811814 +  11p15.5   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SNORA52  -     11p15.5   [Description]    (hg19-Feb_2009)
GoldenPathSNORA52 - 11p15.5 [CytoView hg19]  SNORA52 - 11p15.5 [CytoView hg38]
ImmunoBaseENSG00000199785
genome Data Viewer NCBISNORA52 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AJ609448
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SNORA52
Alternative Splicing GalleryENSG00000199785
Gene ExpressionSNORA52 [ NCBI-GEO ]   SNORA52 [ EBI - ARRAY_EXPRESS ]   SNORA52 [ SEEK ]   SNORA52 [ MEM ]
Gene Expression Viewer (FireBrowse)SNORA52 [ Firebrowse - Broad ]
GenevisibleExpression of SNORA52 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)619565
GTEX Portal (Tissue expression)SNORA52
Human Protein AtlasENSG00000199785-SNORA52 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORA52
DMDM Disease mutations619565
Blocks (Seattle)SNORA52
Human Protein Atlas [tissue]ENSG00000199785-SNORA52 [tissue]
Protein Interaction databases
FunCoupENSG00000199785
BioGRIDSNORA52
STRING (EMBL)SNORA52
ZODIACSNORA52
Ontologies - Pathways
Huge Navigator SNORA52 [HugePedia]
snp3D : Map Gene to Disease619565
BioCentury BCIQSNORA52
ClinGenSNORA52
Clinical trials, drugs, therapy
Protein Interactions : CTD619565
Pharm GKB GenePA144596291
Clinical trialSNORA52
Miscellaneous
canSAR (ICR)SNORA52 (select the gene name)
HarmonizomeSNORA52
DataMed IndexSNORA52
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNORA52
EVEXSNORA52
GoPubMedSNORA52
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Jul 16 16:29:20 CEST 2020

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