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SNORA54 (small nucleolar RNA, H/ACA box 54)

Identity

Alias_symbol (synonym)ACA54
Other alias
HGNC (Hugo) SNORA54
LocusID (NCBI) 677833
Atlas_Id 73710
Location 11p15.4  [Link to chromosome band 11p15]
Location_base_pair Starts at 2985001 and ends at 2985123 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SNORA54   32647
Cards
Entrez_Gene (NCBI)SNORA54  677833  small nucleolar RNA, H/ACA box 54
AliasesACA54
GeneCards (Weizmann)SNORA54
Ensembl hg19 (Hinxton) [Gene_View]  chr11:2985001-2985123 [Contig_View]  SNORA54 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr11:2985001-2985123 [Contig_View]  SNORA54 [Vega]
TCGA cBioPortalSNORA54
AceView (NCBI)SNORA54
Genatlas (Paris)SNORA54
WikiGenes677833
SOURCE (Princeton)SNORA54
Genetics Home Reference (NIH)SNORA54
Genomic and cartography
GoldenPath hg19 (UCSC)SNORA54  -     chr11:2985001-2985123 -  11p15.4   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)SNORA54  -     11p15.4   [Description]    (hg38-Dec_2013)
EnsemblSNORA54 - 11p15.4 [CytoView hg19]  SNORA54 - 11p15.4 [CytoView hg38]
Mapping of homologs : NCBISNORA54 [Mapview hg19]  SNORA54 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AJ609479
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000011 NC_018922 NT_009237 NT_187585 NW_004929378
Consensus coding sequences : CCDS (NCBI)SNORA54
Cluster EST : UnigeneHs.689696 [ NCBI ]
CGAP (NCI)Hs.689696
Gene ExpressionSNORA54 [ NCBI-GEO ]   SNORA54 [ EBI - ARRAY_EXPRESS ]   SNORA54 [ SEEK ]   SNORA54 [ MEM ]
Gene Expression Viewer (FireBrowse)SNORA54 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)677833
GTEX Portal (Tissue expression)SNORA54
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORA54
DMDM Disease mutations677833
Blocks (Seattle)SNORA54
Protein Interaction databases
BioGRIDSNORA54
STRING (EMBL)SNORA54
ZODIACSNORA54
Ontologies - Pathways
Huge Navigator SNORA54 [HugePedia]
snp3D : Map Gene to Disease677833
BioCentury BCIQSNORA54
ClinGenSNORA54
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD677833
Chemical/Pharm GKB GenePA144596293
Clinical trialSNORA54
Miscellaneous
canSAR (ICR)SNORA54 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNORA54
EVEXSNORA54
GoPubMedSNORA54
iHOPSNORA54
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:44:47 CET 2017

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