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SNORA57 (small nucleolar RNA, H/ACA box 57)

Identity

Alias_symbol (synonym)U99
Other alias
HGNC (Hugo) SNORA57
LocusID (NCBI) 692158
Atlas_Id 73713
Location 11q12.3  [Link to chromosome band 11q12]
Location_base_pair Starts at 62665422 and ends at 62665570 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SNORA57   32651
Cards
Entrez_Gene (NCBI)SNORA57  692158  small nucleolar RNA, H/ACA box 57
AliasesU99
GeneCards (Weizmann)SNORA57
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr11:62665422-62665570 [Contig_View]  SNORA57 [Vega]
TCGA cBioPortalSNORA57
AceView (NCBI)SNORA57
Genatlas (Paris)SNORA57
WikiGenes692158
SOURCE (Princeton)SNORA57
Genetics Home Reference (NIH)SNORA57
Genomic and cartography
GoldenPath hg38 (UCSC)SNORA57  -     chr11:62665422-62665570 +  11q12.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SNORA57  -     11q12.3   [Description]    (hg19-Feb_2009)
EnsemblSNORA57 - 11q12.3 [CytoView hg19]  SNORA57 - 11q12.3 [CytoView hg38]
Mapping of homologs : NCBISNORA57 [Mapview hg19]  SNORA57 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SNORA57
Cluster EST : UnigeneHs.687390 [ NCBI ]
CGAP (NCI)Hs.687390
Gene ExpressionSNORA57 [ NCBI-GEO ]   SNORA57 [ EBI - ARRAY_EXPRESS ]   SNORA57 [ SEEK ]   SNORA57 [ MEM ]
Gene Expression Viewer (FireBrowse)SNORA57 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)692158
GTEX Portal (Tissue expression)SNORA57
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORA57
DMDM Disease mutations692158
Blocks (Seattle)SNORA57
Protein Interaction databases
BioGRIDSNORA57
STRING (EMBL)SNORA57
ZODIACSNORA57
Ontologies - Pathways
Huge Navigator SNORA57 [HugePedia]
snp3D : Map Gene to Disease692158
BioCentury BCIQSNORA57
ClinGenSNORA57
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD692158
Chemical/Pharm GKB GenePA144596296
Clinical trialSNORA57
Miscellaneous
canSAR (ICR)SNORA57 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNORA57
EVEXSNORA57
GoPubMedSNORA57
iHOPSNORA57
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 12:28:46 CET 2017

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