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SNORA58B (small nucleolar RNA, H/ACA box 58B)

Identity

Other alias-
HGNC (Hugo) SNORA58B
LocusID (NCBI) 109617023
Atlas_Id 78836
Location 1q21.3  [Link to chromosome band 1q21]
Location_base_pair Starts at 154259727 and ends at 154259862 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SNORA58B   52208
Cards
Entrez_Gene (NCBI)SNORA58B  109617023  small nucleolar RNA, H/ACA box 58B
Aliases
GeneCards (Weizmann)SNORA58B
Ensembl hg19 (Hinxton)ENSG00000201129 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000201129 [Gene_View]  chr1:154259727-154259862 [Contig_View]  SNORA58B [Vega]
ICGC DataPortalENSG00000201129
TCGA cBioPortalSNORA58B
AceView (NCBI)SNORA58B
Genatlas (Paris)SNORA58B
WikiGenes109617023
SOURCE (Princeton)SNORA58B
Genetics Home Reference (NIH)SNORA58B
Genomic and cartography
GoldenPath hg38 (UCSC)SNORA58B  -     chr1:154259727-154259862 +  1q21.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SNORA58B  -     1q21.3   [Description]    (hg19-Feb_2009)
EnsemblSNORA58B - 1q21.3 [CytoView hg19]  SNORA58B - 1q21.3 [CytoView hg38]
Mapping of homologs : NCBISNORA58B [Mapview hg19]  SNORA58B [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SNORA58B
Alternative Splicing GalleryENSG00000201129
Gene ExpressionSNORA58B [ NCBI-GEO ]   SNORA58B [ EBI - ARRAY_EXPRESS ]   SNORA58B [ SEEK ]   SNORA58B [ MEM ]
Gene Expression Viewer (FireBrowse)SNORA58B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)109617023
GTEX Portal (Tissue expression)SNORA58B
Human Protein AtlasENSG00000201129-SNORA58B [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORA58B
DMDM Disease mutations109617023
Blocks (Seattle)SNORA58B
Human Protein Atlas [tissue]ENSG00000201129-SNORA58B [tissue]
Protein Interaction databases
FunCoupENSG00000201129
BioGRIDSNORA58B
STRING (EMBL)SNORA58B
ZODIACSNORA58B
Ontologies - Pathways
Huge Navigator SNORA58B [HugePedia]
snp3D : Map Gene to Disease109617023
BioCentury BCIQSNORA58B
ClinGenSNORA58B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD109617023
Clinical trialSNORA58B
Miscellaneous
canSAR (ICR)SNORA58B (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNORA58B
EVEXSNORA58B
GoPubMedSNORA58B
iHOPSNORA58B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:03:02 CET 2017

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