Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

SNORA5C (small nucleolar RNA, H/ACA box 5C)

Identity

Alias_symbol (synonym)ACA5c
Other alias
HGNC (Hugo) SNORA5C
LocusID (NCBI) 677796
Atlas_Id 73719
Location 7p13  [Link to chromosome band 7p13]
Location_base_pair Starts at 45104906 and ends at 45105042 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SNORA5C   32590
Cards
Entrez_Gene (NCBI)SNORA5C  677796  small nucleolar RNA, H/ACA box 5C
AliasesACA5c
GeneCards (Weizmann)SNORA5C
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr7:45104906-45105042 [Contig_View]  SNORA5C [Vega]
TCGA cBioPortalSNORA5C
AceView (NCBI)SNORA5C
Genatlas (Paris)SNORA5C
WikiGenes677796
SOURCE (Princeton)SNORA5C
Genetics Home Reference (NIH)SNORA5C
Genomic and cartography
GoldenPath hg38 (UCSC)SNORA5C  -     chr7:45104906-45105042 -  7p13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SNORA5C  -     7p13   [Description]    (hg19-Feb_2009)
EnsemblSNORA5C - 7p13 [CytoView hg19]  SNORA5C - 7p13 [CytoView hg38]
Mapping of homologs : NCBISNORA5C [Mapview hg19]  SNORA5C [Mapview hg38]
OMIM611335   
Gene and transcription
Genbank (Entrez)AM055746
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SNORA5C
Cluster EST : UnigeneHs.692718 [ NCBI ]
CGAP (NCI)Hs.692718
Gene ExpressionSNORA5C [ NCBI-GEO ]   SNORA5C [ EBI - ARRAY_EXPRESS ]   SNORA5C [ SEEK ]   SNORA5C [ MEM ]
Gene Expression Viewer (FireBrowse)SNORA5C [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)677796
GTEX Portal (Tissue expression)SNORA5C
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORA5C
DMDM Disease mutations677796
Blocks (Seattle)SNORA5C
Protein Interaction databases
BioGRIDSNORA5C
STRING (EMBL)SNORA5C
ZODIACSNORA5C
Ontologies - Pathways
Huge Navigator SNORA5C [HugePedia]
snp3D : Map Gene to Disease677796
BioCentury BCIQSNORA5C
ClinGenSNORA5C
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD677796
Chemical/Pharm GKB GenePA144596326
Clinical trialSNORA5C
Miscellaneous
canSAR (ICR)SNORA5C (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNORA5C
EVEXSNORA5C
GoPubMedSNORA5C
iHOPSNORA5C
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 31 15:42:20 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.