Atlas of Genetics and Cytogenetics in Oncology and Haematology

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SNORA63 (small nucleolar RNA, H/ACA box 63)

Identity

Alias (NCBI)E3
E3-2
RNE3
RNU107
SNORA63A
elF-4AII
HGNC (Hugo) SNORA63
HGNC Alias symbE3
E3-2
SNORA63A
HGNC Previous nameRNE3
 RNU107
HGNC Previous nameRNA, U107 small nucleolar
LocusID (NCBI) 6043
Atlas_Id 53049
Location 3q27.3  [Link to chromosome band 3q27]
Location_base_pair Starts at 186787299 and ends at 186787433 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
SNORA63 (3q27.3) / LAPTM5 (1p35.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)SNORA63   10106
Cards
Entrez_Gene (NCBI)SNORA63  6043  small nucleolar RNA, H/ACA box 63
AliasesE3; E3-2; RNE3; RNU107; 
SNORA63A; elF-4AII
GeneCards (Weizmann)SNORA63
Ensembl hg19 (Hinxton)ENSG00000200320 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000200320 [Gene_View]  ENSG00000200320 [Sequence]  chr3:186787299-186787433 [Contig_View]  SNORA63 [Vega]
ICGC DataPortalENSG00000200320
TCGA cBioPortalSNORA63
AceView (NCBI)SNORA63
Genatlas (Paris)SNORA63
WikiGenes6043
SOURCE (Princeton)SNORA63
Genetics Home Reference (NIH)SNORA63
Genomic and cartography
GoldenPath hg38 (UCSC)SNORA63  -     chr3:186787299-186787433 +  3q27.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SNORA63  -     3q27.3   [Description]    (hg19-Feb_2009)
GoldenPathSNORA63 - 3q27.3 [CytoView hg19]  SNORA63 - 3q27.3 [CytoView hg38]
ImmunoBaseENSG00000200320
genome Data Viewer NCBISNORA63 [Mapview hg19]  
OMIM180647   
Gene and transcription
Genbank (Entrez)L07384 S67154
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SNORA63
Alternative Splicing GalleryENSG00000200320
Gene ExpressionSNORA63 [ NCBI-GEO ]   SNORA63 [ EBI - ARRAY_EXPRESS ]   SNORA63 [ SEEK ]   SNORA63 [ MEM ]
Gene Expression Viewer (FireBrowse)SNORA63 [ Firebrowse - Broad ]
GenevisibleExpression of SNORA63 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)6043
GTEX Portal (Tissue expression)SNORA63
Human Protein AtlasENSG00000200320-SNORA63 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORA63
DMDM Disease mutations6043
Blocks (Seattle)SNORA63
Human Protein Atlas [tissue]ENSG00000200320-SNORA63 [tissue]
Protein Interaction databases
FunCoupENSG00000200320
BioGRIDSNORA63
STRING (EMBL)SNORA63
ZODIACSNORA63
Ontologies - Pathways
Huge Navigator SNORA63 [HugePedia]
snp3D : Map Gene to Disease6043
BioCentury BCIQSNORA63
ClinGenSNORA63
Clinical trials, drugs, therapy
Protein Interactions : CTD6043
Pharm GKB GenePA34471
Clinical trialSNORA63
Miscellaneous
canSAR (ICR)SNORA63 (select the gene name)
HarmonizomeSNORA63
DataMed IndexSNORA63
Probes
Litterature
PubMed11 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNORA63
EVEXSNORA63
GoPubMedSNORA63
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Jul 16 15:36:53 CEST 2020
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