Atlas of Genetics and Cytogenetics in Oncology and Haematology


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SNORA73A (small nucleolar RNA, H/ACA box 73A)

Identity

Alias_namesRNE1
RNU17A
RNA
Alias_symbol (synonym)U17A
E1-7
E1b
E1
Other alias
HGNC (Hugo) SNORA73A
LocusID (NCBI) 6080
Atlas_Id 53050
Location 1p35.3  [Link to chromosome band 1p35]
Location_base_pair Starts at 28507365 and ends at 28507571 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SNORA73A   10115
Cards
Entrez_Gene (NCBI)SNORA73A  6080  small nucleolar RNA, H/ACA box 73A
AliasesE1; E1-7; E1b; RNE1; 
RNU17A; U17A
GeneCards (Weizmann)SNORA73A
Ensembl hg19 (Hinxton)ENSG00000274266 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000274266 [Gene_View]  chr1:28507365-28507571 [Contig_View]  SNORA73A [Vega]
ICGC DataPortalENSG00000274266
TCGA cBioPortalSNORA73A
AceView (NCBI)SNORA73A
Genatlas (Paris)SNORA73A
WikiGenes6080
SOURCE (Princeton)SNORA73A
Genetics Home Reference (NIH)SNORA73A
Genomic and cartography
GoldenPath hg38 (UCSC)SNORA73A  -     chr1:28507365-28507571 +  1p35.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SNORA73A  -     1p35.3   [Description]    (hg19-Feb_2009)
EnsemblSNORA73A - 1p35.3 [CytoView hg19]  SNORA73A - 1p35.3 [CytoView hg38]
Mapping of homologs : NCBISNORA73A [Mapview hg19]  SNORA73A [Mapview hg38]
OMIM180645   
Gene and transcription
Genbank (Entrez)CX783521 L07382 S63405
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SNORA73A
Alternative Splicing GalleryENSG00000274266
Gene ExpressionSNORA73A [ NCBI-GEO ]   SNORA73A [ EBI - ARRAY_EXPRESS ]   SNORA73A [ SEEK ]   SNORA73A [ MEM ]
Gene Expression Viewer (FireBrowse)SNORA73A [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)6080
GTEX Portal (Tissue expression)SNORA73A
Human Protein AtlasENSG00000274266-SNORA73A [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORA73A
DMDM Disease mutations6080
Blocks (Seattle)SNORA73A
Human Protein Atlas [tissue]ENSG00000274266-SNORA73A [tissue]
Protein Interaction databases
FunCoupENSG00000274266
BioGRIDSNORA73A
STRING (EMBL)SNORA73A
ZODIACSNORA73A
Ontologies - Pathways
Huge Navigator SNORA73A [HugePedia]
snp3D : Map Gene to Disease6080
BioCentury BCIQSNORA73A
ClinGenSNORA73A
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD6080
Chemical/Pharm GKB GenePA34481
Clinical trialSNORA73A
Miscellaneous
canSAR (ICR)SNORA73A (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNORA73A
EVEXSNORA73A
GoPubMedSNORA73A
iHOPSNORA73A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 14:35:48 CET 2017

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