Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

SNORA74D (small nucleolar RNA, H/ACA box 74D)

Identity

Other alias-
HGNC (Hugo) SNORA74D
LocusID (NCBI) 109616975
Atlas_Id 79043
Location 5q31.2  [Link to chromosome band 5q31]
Location_base_pair Starts at 139276180 and ends at 139276323 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SNORA74D   52219
Cards
Entrez_Gene (NCBI)SNORA74D  109616975  small nucleolar RNA, H/ACA box 74D
Aliases
GeneCards (Weizmann)SNORA74D
Ensembl hg19 (Hinxton)ENSG00000252213 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000252213 [Gene_View]  ENSG00000252213 [Sequence]  chr5:139276180-139276323 [Contig_View]  SNORA74D [Vega]
ICGC DataPortalENSG00000252213
TCGA cBioPortalSNORA74D
AceView (NCBI)SNORA74D
Genatlas (Paris)SNORA74D
WikiGenes109616975
SOURCE (Princeton)SNORA74D
Genetics Home Reference (NIH)SNORA74D
Genomic and cartography
GoldenPath hg38 (UCSC)SNORA74D  -     chr5:139276180-139276323 +  5q31.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SNORA74D  -     5q31.2   [Description]    (hg19-Feb_2009)
EnsemblSNORA74D - 5q31.2 [CytoView hg19]  SNORA74D - 5q31.2 [CytoView hg38]
Mapping of homologs : NCBISNORA74D [Mapview hg19]  SNORA74D [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SNORA74D
Alternative Splicing GalleryENSG00000252213
Gene ExpressionSNORA74D [ NCBI-GEO ]   SNORA74D [ EBI - ARRAY_EXPRESS ]   SNORA74D [ SEEK ]   SNORA74D [ MEM ]
Gene Expression Viewer (FireBrowse)SNORA74D [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)109616975
GTEX Portal (Tissue expression)SNORA74D
Human Protein AtlasENSG00000252213-SNORA74D [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORA74D
DMDM Disease mutations109616975
Blocks (Seattle)SNORA74D
Human Protein Atlas [tissue]ENSG00000252213-SNORA74D [tissue]
Protein Interaction databases
FunCoupENSG00000252213
BioGRIDSNORA74D
STRING (EMBL)SNORA74D
ZODIACSNORA74D
Ontologies - Pathways
Huge Navigator SNORA74D [HugePedia]
snp3D : Map Gene to Disease109616975
BioCentury BCIQSNORA74D
ClinGenSNORA74D
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD109616975
Clinical trialSNORA74D
Miscellaneous
canSAR (ICR)SNORA74D (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNORA74D
EVEXSNORA74D
GoPubMedSNORA74D
iHOPSNORA74D
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 14:30:56 CEST 2018

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.