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SNORA79B (small nucleolar RNA, H/ACA box 79B)

Identity

Other alias-
HGNC (Hugo) SNORA79B
LocusID (NCBI) 109616976
Atlas_Id 79494
Location 14q11.2  [Link to chromosome band 14q11]
Location_base_pair Starts at 20323179 and ends at 20323326 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SNORA79B   52222
Cards
Entrez_Gene (NCBI)SNORA79B  109616976  small nucleolar RNA, H/ACA box 79B
Aliases
GeneCards (Weizmann)SNORA79B
Ensembl hg19 (Hinxton)ENSG00000222489 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000222489 [Gene_View]  chr14:20323179-20323326 [Contig_View]  SNORA79B [Vega]
ICGC DataPortalENSG00000222489
TCGA cBioPortalSNORA79B
AceView (NCBI)SNORA79B
Genatlas (Paris)SNORA79B
WikiGenes109616976
SOURCE (Princeton)SNORA79B
Genetics Home Reference (NIH)SNORA79B
Genomic and cartography
GoldenPath hg38 (UCSC)SNORA79B  -     chr14:20323179-20323326 -  14q11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SNORA79B  -     14q11.2   [Description]    (hg19-Feb_2009)
EnsemblSNORA79B - 14q11.2 [CytoView hg19]  SNORA79B - 14q11.2 [CytoView hg38]
Mapping of homologs : NCBISNORA79B [Mapview hg19]  SNORA79B [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SNORA79B
Alternative Splicing GalleryENSG00000222489
Gene ExpressionSNORA79B [ NCBI-GEO ]   SNORA79B [ EBI - ARRAY_EXPRESS ]   SNORA79B [ SEEK ]   SNORA79B [ MEM ]
Gene Expression Viewer (FireBrowse)SNORA79B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)109616976
GTEX Portal (Tissue expression)SNORA79B
Human Protein AtlasENSG00000222489-SNORA79B [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORA79B
DMDM Disease mutations109616976
Blocks (Seattle)SNORA79B
Human Protein Atlas [tissue]ENSG00000222489-SNORA79B [tissue]
Protein Interaction databases
FunCoupENSG00000222489
BioGRIDSNORA79B
STRING (EMBL)SNORA79B
ZODIACSNORA79B
Ontologies - Pathways
Huge Navigator SNORA79B [HugePedia]
snp3D : Map Gene to Disease109616976
BioCentury BCIQSNORA79B
ClinGenSNORA79B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD109616976
Clinical trialSNORA79B
Miscellaneous
canSAR (ICR)SNORA79B (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNORA79B
EVEXSNORA79B
GoPubMedSNORA79B
iHOPSNORA79B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:30:30 CET 2017

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