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SNORA80C (small nucleolar RNA, H/ACA box 80C)

Identity

Other alias-
HGNC (Hugo) SNORA80C
LocusID (NCBI) 109616959
Atlas_Id 79519
Location 16p11.2  [Link to chromosome band 16p11]
Location_base_pair Starts at 30419625 and ends at 30419759 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SNORA80C   50434
Cards
Entrez_Gene (NCBI)SNORA80C  109616959  small nucleolar RNA, H/ACA box 80C
Aliases
GeneCards (Weizmann)SNORA80C
Ensembl hg19 (Hinxton)ENSG00000199787 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000199787 [Gene_View]  chr16:30419625-30419759 [Contig_View]  SNORA80C [Vega]
ICGC DataPortalENSG00000199787
TCGA cBioPortalSNORA80C
AceView (NCBI)SNORA80C
Genatlas (Paris)SNORA80C
WikiGenes109616959
SOURCE (Princeton)SNORA80C
Genetics Home Reference (NIH)SNORA80C
Genomic and cartography
GoldenPath hg38 (UCSC)SNORA80C  -     chr16:30419625-30419759 -  16p11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SNORA80C  -     16p11.2   [Description]    (hg19-Feb_2009)
EnsemblSNORA80C - 16p11.2 [CytoView hg19]  SNORA80C - 16p11.2 [CytoView hg38]
Mapping of homologs : NCBISNORA80C [Mapview hg19]  SNORA80C [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SNORA80C
Alternative Splicing GalleryENSG00000199787
Gene ExpressionSNORA80C [ NCBI-GEO ]   SNORA80C [ EBI - ARRAY_EXPRESS ]   SNORA80C [ SEEK ]   SNORA80C [ MEM ]
Gene Expression Viewer (FireBrowse)SNORA80C [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)109616959
GTEX Portal (Tissue expression)SNORA80C
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORA80C
DMDM Disease mutations109616959
Blocks (Seattle)SNORA80C
Human Protein AtlasENSG00000199787
Protein Interaction databases
FunCoupENSG00000199787
BioGRIDSNORA80C
STRING (EMBL)SNORA80C
ZODIACSNORA80C
Ontologies - Pathways
Huge Navigator SNORA80C [HugePedia]
snp3D : Map Gene to Disease109616959
BioCentury BCIQSNORA80C
ClinGenSNORA80C
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD109616959
Clinical trialSNORA80C
Miscellaneous
canSAR (ICR)SNORA80C (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNORA80C
EVEXSNORA80C
GoPubMedSNORA80C
iHOPSNORA80C
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:39:08 CEST 2017

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