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SNORA80D (small nucleolar RNA, H/ACA box 80D)

Identity

Other alias-
HGNC (Hugo) SNORA80D
LocusID (NCBI) 109616999
Atlas_Id 78818
Location 7p22.1  [Link to chromosome band 7p22]
Location_base_pair Starts at 6016877 and ends at 6017011 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SNORA80D   50435
Cards
Entrez_Gene (NCBI)SNORA80D  109616999  small nucleolar RNA, H/ACA box 80D
Aliases
GeneCards (Weizmann)SNORA80D
Ensembl hg19 (Hinxton)ENSG00000207217 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000207217 [Gene_View]  chr7:6016877-6017011 [Contig_View]  SNORA80D [Vega]
ICGC DataPortalENSG00000207217
TCGA cBioPortalSNORA80D
AceView (NCBI)SNORA80D
Genatlas (Paris)SNORA80D
WikiGenes109616999
SOURCE (Princeton)SNORA80D
Genetics Home Reference (NIH)SNORA80D
Genomic and cartography
GoldenPath hg38 (UCSC)SNORA80D  -     chr7:6016877-6017011 +  7p22.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SNORA80D  -     7p22.1   [Description]    (hg19-Feb_2009)
EnsemblSNORA80D - 7p22.1 [CytoView hg19]  SNORA80D - 7p22.1 [CytoView hg38]
Mapping of homologs : NCBISNORA80D [Mapview hg19]  SNORA80D [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SNORA80D
Alternative Splicing GalleryENSG00000207217
Gene ExpressionSNORA80D [ NCBI-GEO ]   SNORA80D [ EBI - ARRAY_EXPRESS ]   SNORA80D [ SEEK ]   SNORA80D [ MEM ]
Gene Expression Viewer (FireBrowse)SNORA80D [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)109616999
GTEX Portal (Tissue expression)SNORA80D
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORA80D
DMDM Disease mutations109616999
Blocks (Seattle)SNORA80D
Human Protein AtlasENSG00000207217
Protein Interaction databases
FunCoupENSG00000207217
BioGRIDSNORA80D
STRING (EMBL)SNORA80D
ZODIACSNORA80D
Ontologies - Pathways
Huge Navigator SNORA80D [HugePedia]
snp3D : Map Gene to Disease109616999
BioCentury BCIQSNORA80D
ClinGenSNORA80D
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD109616999
Clinical trialSNORA80D
Miscellaneous
canSAR (ICR)SNORA80D (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNORA80D
EVEXSNORA80D
GoPubMedSNORA80D
iHOPSNORA80D
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:39:09 CEST 2017

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