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SNORD102 (small nucleolar RNA, C/D box 102)

Identity

Alias_namesRNU102
RNA, U102 small nucleolar
Alias_symbol (synonym)U102
Other aliasZ18
HGNC (Hugo) SNORD102
LocusID (NCBI) 26771
Atlas_Id 73762
Location 13q12.2  [Link to chromosome band 13q12]
Location_base_pair Starts at 27255064 and ends at 27255135 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SNORD102   10099
Cards
Entrez_Gene (NCBI)SNORD102  26771  small nucleolar RNA, C/D box 102
AliasesRNU102; Z18
GeneCards (Weizmann)SNORD102
Ensembl hg19 (Hinxton)ENSG00000207500 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000207500 [Gene_View]  ENSG00000207500 [Sequence]  chr13:27255064-27255135 [Contig_View]  SNORD102 [Vega]
ICGC DataPortalENSG00000207500
TCGA cBioPortalSNORD102
AceView (NCBI)SNORD102
Genatlas (Paris)SNORD102
WikiGenes26771
SOURCE (Princeton)SNORD102
Genetics Home Reference (NIH)SNORD102
Genomic and cartography
GoldenPath hg38 (UCSC)SNORD102  -     chr13:27255064-27255135 +  13q12.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SNORD102  -     13q12.2   [Description]    (hg19-Feb_2009)
SNORD102 - 13q12.2 [CytoView hg19]  SNORD102 - 13q12.2 [CytoView hg38]
Mapping of homologs : NCBISNORD102 [Mapview hg19]  SNORD102 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SNORD102
Alternative Splicing GalleryENSG00000207500
Gene ExpressionSNORD102 [ NCBI-GEO ]   SNORD102 [ EBI - ARRAY_EXPRESS ]   SNORD102 [ SEEK ]   SNORD102 [ MEM ]
Gene Expression Viewer (FireBrowse)SNORD102 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)26771
GTEX Portal (Tissue expression)SNORD102
Human Protein AtlasENSG00000207500-SNORD102 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORD102
DMDM Disease mutations26771
Blocks (Seattle)SNORD102
Human Protein Atlas [tissue]ENSG00000207500-SNORD102 [tissue]
Protein Interaction databases
FunCoupENSG00000207500
BioGRIDSNORD102
STRING (EMBL)SNORD102
ZODIACSNORD102
Ontologies - Pathways
Huge Navigator SNORD102 [HugePedia]
snp3D : Map Gene to Disease26771
BioCentury BCIQSNORD102
ClinGenSNORD102
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD26771
Chemical/Pharm GKB GenePA34464
Clinical trialSNORD102
Miscellaneous
canSAR (ICR)SNORD102 (select the gene name)
DataMed IndexSNORD102
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNORD102
EVEXSNORD102
GoPubMedSNORD102
iHOPSNORD102
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Apr 30 13:57:22 CEST 2019

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