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SNORD107 (small nucleolar RNA, C/D box 107)

Identity

Alias_symbol (synonym)HBII-436
Other alias
HGNC (Hugo) SNORD107
LocusID (NCBI) 91380
Atlas_Id 73768
Location 15q11.2  [Link to chromosome band 15q11]
Location_base_pair Starts at 24981994 and ends at 24982068 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SNORD107   32771
Cards
Entrez_Gene (NCBI)SNORD107  91380  small nucleolar RNA, C/D box 107
AliasesHBII-436
GeneCards (Weizmann)SNORD107
Ensembl hg19 (Hinxton)ENSG00000276314 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000276314 [Gene_View]  chr15:24981994-24982068 [Contig_View]  SNORD107 [Vega]
ICGC DataPortalENSG00000276314
TCGA cBioPortalSNORD107
AceView (NCBI)SNORD107
Genatlas (Paris)SNORD107
WikiGenes91380
SOURCE (Princeton)SNORD107
Genetics Home Reference (NIH)SNORD107
Genomic and cartography
GoldenPath hg38 (UCSC)SNORD107  -     chr15:24981994-24982068 +  15q11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SNORD107  -     15q11.2   [Description]    (hg19-Feb_2009)
EnsemblSNORD107 - 15q11.2 [CytoView hg19]  SNORD107 - 15q11.2 [CytoView hg38]
Mapping of homologs : NCBISNORD107 [Mapview hg19]  SNORD107 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SNORD107
Alternative Splicing GalleryENSG00000276314
Gene ExpressionSNORD107 [ NCBI-GEO ]   SNORD107 [ EBI - ARRAY_EXPRESS ]   SNORD107 [ SEEK ]   SNORD107 [ MEM ]
Gene Expression Viewer (FireBrowse)SNORD107 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)91380
GTEX Portal (Tissue expression)SNORD107
Human Protein AtlasENSG00000276314-SNORD107 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORD107
DMDM Disease mutations91380
Blocks (Seattle)SNORD107
Human Protein Atlas [tissue]ENSG00000276314-SNORD107 [tissue]
Protein Interaction databases
FunCoupENSG00000276314
BioGRIDSNORD107
STRING (EMBL)SNORD107
ZODIACSNORD107
Ontologies - Pathways
Huge Navigator SNORD107 [HugePedia]
snp3D : Map Gene to Disease91380
BioCentury BCIQSNORD107
ClinGenSNORD107
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD91380
Chemical/Pharm GKB GenePA145007760
Clinical trialSNORD107
Miscellaneous
canSAR (ICR)SNORD107 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNORD107
EVEXSNORD107
GoPubMedSNORD107
iHOPSNORD107
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 12:29:04 CET 2017

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