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SNORD108 (small nucleolar RNA, C/D box 108)

Identity

Alias_symbol (synonym)HBII-437
Other alias
HGNC (Hugo) SNORD108
LocusID (NCBI) 338427
Atlas_Id 73769
Location 15q11.2  [Link to chromosome band 15q11]
Location_base_pair Starts at 24986925 and ends at 24986993 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SNORD108   32772
Cards
Entrez_Gene (NCBI)SNORD108  338427  small nucleolar RNA, C/D box 108
AliasesHBII-437
GeneCards (Weizmann)SNORD108
Ensembl hg19 (Hinxton)ENSG00000239014 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000239014 [Gene_View]  chr15:24986925-24986993 [Contig_View]  SNORD108 [Vega]
ICGC DataPortalENSG00000239014
TCGA cBioPortalSNORD108
AceView (NCBI)SNORD108
Genatlas (Paris)SNORD108
WikiGenes338427
SOURCE (Princeton)SNORD108
Genetics Home Reference (NIH)SNORD108
Genomic and cartography
GoldenPath hg38 (UCSC)SNORD108  -     chr15:24986925-24986993 +  15q11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SNORD108  -     15q11.2   [Description]    (hg19-Feb_2009)
EnsemblSNORD108 - 15q11.2 [CytoView hg19]  SNORD108 - 15q11.2 [CytoView hg38]
Mapping of homologs : NCBISNORD108 [Mapview hg19]  SNORD108 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SNORD108
Alternative Splicing GalleryENSG00000239014
Gene ExpressionSNORD108 [ NCBI-GEO ]   SNORD108 [ EBI - ARRAY_EXPRESS ]   SNORD108 [ SEEK ]   SNORD108 [ MEM ]
Gene Expression Viewer (FireBrowse)SNORD108 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)338427
GTEX Portal (Tissue expression)SNORD108
Human Protein AtlasENSG00000239014-SNORD108 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORD108
DMDM Disease mutations338427
Blocks (Seattle)SNORD108
Human Protein Atlas [tissue]ENSG00000239014-SNORD108 [tissue]
Protein Interaction databases
FunCoupENSG00000239014
BioGRIDSNORD108
STRING (EMBL)SNORD108
ZODIACSNORD108
Ontologies - Pathways
Huge Navigator SNORD108 [HugePedia]
snp3D : Map Gene to Disease338427
BioCentury BCIQSNORD108
ClinGenSNORD108
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD338427
Chemical/Pharm GKB GenePA145007762
Clinical trialSNORD108
Miscellaneous
canSAR (ICR)SNORD108 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNORD108
EVEXSNORD108
GoPubMedSNORD108
iHOPSNORD108
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:32:13 CET 2017

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