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SNORD109A (small nucleolar RNA, C/D box 109A)

Identity

Alias_symbol (synonym)HBII-438a
Other aliasHBII-438A
HGNC (Hugo) SNORD109A
LocusID (NCBI) 338428
Atlas_Id 73770
Location 15q11.2  [Link to chromosome band 15q11]
Location_base_pair Starts at 25287121 and ends at 25287187 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SNORD109A   32773
Cards
Entrez_Gene (NCBI)SNORD109A  338428  small nucleolar RNA, C/D box 109A
AliasesHBII-438A
GeneCards (Weizmann)SNORD109A
Ensembl hg19 (Hinxton)ENSG00000274640 [Gene_View]  chr15:25287121-25287187 [Contig_View]  SNORD109A [Vega]
Ensembl hg38 (Hinxton)ENSG00000274640 [Gene_View]  chr15:25287121-25287187 [Contig_View]  SNORD109A [Vega]
ICGC DataPortalENSG00000274640
TCGA cBioPortalSNORD109A
AceView (NCBI)SNORD109A
Genatlas (Paris)SNORD109A
WikiGenes338428
SOURCE (Princeton)SNORD109A
Genetics Home Reference (NIH)SNORD109A
Genomic and cartography
GoldenPath hg19 (UCSC)SNORD109A  -     chr15:25287121-25287187 +  15q11.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)SNORD109A  -     15q11.2   [Description]    (hg38-Dec_2013)
EnsemblSNORD109A - 15q11.2 [CytoView hg19]  SNORD109A - 15q11.2 [CytoView hg38]
Mapping of homologs : NCBISNORD109A [Mapview hg19]  SNORD109A [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000015 NC_018926 NG_002690 NT_010194 NW_004929397
Consensus coding sequences : CCDS (NCBI)SNORD109A
Alternative Splicing GalleryENSG00000274640
Gene ExpressionSNORD109A [ NCBI-GEO ]   SNORD109A [ EBI - ARRAY_EXPRESS ]   SNORD109A [ SEEK ]   SNORD109A [ MEM ]
Gene Expression Viewer (FireBrowse)SNORD109A [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)338428
GTEX Portal (Tissue expression)SNORD109A
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORD109A
DMDM Disease mutations338428
Blocks (Seattle)SNORD109A
Human Protein AtlasENSG00000274640
Protein Interaction databases
FunCoupENSG00000274640
BioGRIDSNORD109A
STRING (EMBL)SNORD109A
ZODIACSNORD109A
Ontologies - Pathways
Huge Navigator SNORD109A [HugePedia]
snp3D : Map Gene to Disease338428
BioCentury BCIQSNORD109A
ClinGenSNORD109A
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD338428
Chemical/Pharm GKB GenePA145007764
Clinical trialSNORD109A
Miscellaneous
canSAR (ICR)SNORD109A (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNORD109A
EVEXSNORD109A
GoPubMedSNORD109A
iHOPSNORD109A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:45:03 CET 2017

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