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SNORD109B (small nucleolar RNA, C/D box 109B)

Identity

Alias_symbol (synonym)HBII-438b
Other aliasHBII-438B
HGNC (Hugo) SNORD109B
LocusID (NCBI) 338429
Atlas_Id 73771
Location 15q11.2  [Link to chromosome band 15q11]
Location_base_pair Starts at 25041974 and ends at 25042040 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SNORD109B   32774
Cards
Entrez_Gene (NCBI)SNORD109B  338429  small nucleolar RNA, C/D box 109B
AliasesHBII-438B
GeneCards (Weizmann)SNORD109B
Ensembl hg19 (Hinxton)ENSG00000239169 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000239169 [Gene_View]  chr15:25041974-25042040 [Contig_View]  SNORD109B [Vega]
ICGC DataPortalENSG00000239169
TCGA cBioPortalSNORD109B
AceView (NCBI)SNORD109B
Genatlas (Paris)SNORD109B
WikiGenes338429
SOURCE (Princeton)SNORD109B
Genetics Home Reference (NIH)SNORD109B
Genomic and cartography
GoldenPath hg38 (UCSC)SNORD109B  -     chr15:25041974-25042040 +  15q11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SNORD109B  -     15q11.2   [Description]    (hg19-Feb_2009)
EnsemblSNORD109B - 15q11.2 [CytoView hg19]  SNORD109B - 15q11.2 [CytoView hg38]
Mapping of homologs : NCBISNORD109B [Mapview hg19]  SNORD109B [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SNORD109B
Alternative Splicing GalleryENSG00000239169
Gene ExpressionSNORD109B [ NCBI-GEO ]   SNORD109B [ EBI - ARRAY_EXPRESS ]   SNORD109B [ SEEK ]   SNORD109B [ MEM ]
Gene Expression Viewer (FireBrowse)SNORD109B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)338429
GTEX Portal (Tissue expression)SNORD109B
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORD109B
DMDM Disease mutations338429
Blocks (Seattle)SNORD109B
Human Protein AtlasENSG00000239169
Protein Interaction databases
FunCoupENSG00000239169
BioGRIDSNORD109B
STRING (EMBL)SNORD109B
ZODIACSNORD109B
Ontologies - Pathways
Huge Navigator SNORD109B [HugePedia]
snp3D : Map Gene to Disease338429
BioCentury BCIQSNORD109B
ClinGenSNORD109B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD338429
Chemical/Pharm GKB GenePA145007766
Clinical trialSNORD109B
Miscellaneous
canSAR (ICR)SNORD109B (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNORD109B
EVEXSNORD109B
GoPubMedSNORD109B
iHOPSNORD109B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 31 15:42:33 CEST 2017

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