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SNORD110 (small nucleolar RNA, C/D box 110)

Identity

Alias_symbol (synonym)HBII-55
Other alias
HGNC (Hugo) SNORD110
LocusID (NCBI) 692213
Atlas_Id 73773
Location 20p13  [Link to chromosome band 20p13]
Location_base_pair Starts at 2654212 and ends at 2654286 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SNORD110   32775
Cards
Entrez_Gene (NCBI)SNORD110  692213  small nucleolar RNA, C/D box 110
AliasesHBII-55
GeneCards (Weizmann)SNORD110
Ensembl hg19 (Hinxton)ENSG00000221116 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000221116 [Gene_View]  ENSG00000221116 [Sequence]  chr20:2654212-2654286 [Contig_View]  SNORD110 [Vega]
ICGC DataPortalENSG00000221116
TCGA cBioPortalSNORD110
AceView (NCBI)SNORD110
Genatlas (Paris)SNORD110
WikiGenes692213
SOURCE (Princeton)SNORD110
Genetics Home Reference (NIH)SNORD110
Genomic and cartography
GoldenPath hg38 (UCSC)SNORD110  -     chr20:2654212-2654286 +  20p13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SNORD110  -     20p13   [Description]    (hg19-Feb_2009)
GoldenPathSNORD110 - 20p13 [CytoView hg19]  SNORD110 - 20p13 [CytoView hg38]
ImmunoBaseENSG00000221116
genome Data Viewer NCBISNORD110 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SNORD110
Alternative Splicing GalleryENSG00000221116
Gene ExpressionSNORD110 [ NCBI-GEO ]   SNORD110 [ EBI - ARRAY_EXPRESS ]   SNORD110 [ SEEK ]   SNORD110 [ MEM ]
Gene Expression Viewer (FireBrowse)SNORD110 [ Firebrowse - Broad ]
GenevisibleExpression of SNORD110 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)692213
GTEX Portal (Tissue expression)SNORD110
Human Protein AtlasENSG00000221116-SNORD110 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORD110
DMDM Disease mutations692213
Blocks (Seattle)SNORD110
Human Protein Atlas [tissue]ENSG00000221116-SNORD110 [tissue]
Protein Interaction databases
FunCoupENSG00000221116
BioGRIDSNORD110
STRING (EMBL)SNORD110
ZODIACSNORD110
Ontologies - Pathways
Huge Navigator SNORD110 [HugePedia]
snp3D : Map Gene to Disease692213
BioCentury BCIQSNORD110
ClinGenSNORD110
Clinical trials, drugs, therapy
Protein Interactions : CTD692213
Pharm GKB GenePA145007728
Clinical trialSNORD110
Miscellaneous
canSAR (ICR)SNORD110 (select the gene name)
HarmonizomeSNORD110
DataMed IndexSNORD110
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNORD110
EVEXSNORD110
GoPubMedSNORD110
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri Jul 10 20:37:32 CEST 2020

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