Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

SNORD111B (small nucleolar RNA, C/D box 111B)

Identity

Alias_namesMIR3647
microRNA 3647
Alias_symbol (synonym)hsa-mir-3647
Other alias
HGNC (Hugo) SNORD111B
LocusID (NCBI) 100113402
Atlas_Id 73775
Location 16q22.1  [Link to chromosome band 16q22]
Location_base_pair Starts at 70563402 and ends at 70563502 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SNORD111B   33579
Cards
Entrez_Gene (NCBI)SNORD111B  100113402  small nucleolar RNA, C/D box 111B
AliasesMIR3647
GeneCards (Weizmann)SNORD111B
Ensembl hg19 (Hinxton) [Gene_View]  chr16:70563402-70563502 [Contig_View]  SNORD111B [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr16:70563402-70563502 [Contig_View]  SNORD111B [Vega]
TCGA cBioPortalSNORD111B
AceView (NCBI)SNORD111B
Genatlas (Paris)SNORD111B
WikiGenes100113402
SOURCE (Princeton)SNORD111B
Genetics Home Reference (NIH)SNORD111B
Genomic and cartography
GoldenPath hg19 (UCSC)SNORD111B  -     chr16:70563402-70563502 +  16q22.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)SNORD111B  -     16q22.1   [Description]    (hg38-Dec_2013)
EnsemblSNORD111B - 16q22.1 [CytoView hg19]  SNORD111B - 16q22.1 [CytoView hg38]
Mapping of homologs : NCBISNORD111B [Mapview hg19]  SNORD111B [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000016 NC_018927 NT_010498 NW_004929402
Consensus coding sequences : CCDS (NCBI)SNORD111B
Gene ExpressionSNORD111B [ NCBI-GEO ]   SNORD111B [ EBI - ARRAY_EXPRESS ]   SNORD111B [ SEEK ]   SNORD111B [ MEM ]
Gene Expression Viewer (FireBrowse)SNORD111B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100113402
GTEX Portal (Tissue expression)SNORD111B
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORD111B
DMDM Disease mutations100113402
Blocks (Seattle)SNORD111B
Protein Interaction databases
BioGRIDSNORD111B
STRING (EMBL)SNORD111B
ZODIACSNORD111B
Ontologies - Pathways
Huge Navigator SNORD111B [HugePedia]
snp3D : Map Gene to Disease100113402
BioCentury BCIQSNORD111B
ClinGenSNORD111B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100113402
Chemical/Pharm GKB GenePA162404170
Clinical trialSNORD111B
Miscellaneous
canSAR (ICR)SNORD111B (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNORD111B
EVEXSNORD111B
GoPubMedSNORD111B
iHOPSNORD111B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:45:04 CET 2017

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.