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SNORD115-12 (small nucleolar RNA, C/D box 115-12)

Identity

Alias_symbol (synonym)HBII-52-12
Other alias
HGNC (Hugo) SNORD115-12
LocusID (NCBI) 100033449
Atlas_Id 73817
Location 15q11.2  [Link to chromosome band 15q11]
Location_base_pair Starts at 25178741 and ends at 25178819 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SNORD115-12   33031
Cards
Entrez_Gene (NCBI)SNORD115-12  100033449  small nucleolar RNA, C/D box 115-12
AliasesHBII-52-12
GeneCards (Weizmann)SNORD115-12
Ensembl hg19 (Hinxton)ENSG00000199453 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000199453 [Gene_View]  chr15:25178741-25178819 [Contig_View]  SNORD115-12 [Vega]
ICGC DataPortalENSG00000199453
TCGA cBioPortalSNORD115-12
AceView (NCBI)SNORD115-12
Genatlas (Paris)SNORD115-12
WikiGenes100033449
SOURCE (Princeton)SNORD115-12
Genetics Home Reference (NIH)SNORD115-12
Genomic and cartography
GoldenPath hg38 (UCSC)SNORD115-12  -     chr15:25178741-25178819 +  15q11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SNORD115-12  -     15q11.2   [Description]    (hg19-Feb_2009)
EnsemblSNORD115-12 - 15q11.2 [CytoView hg19]  SNORD115-12 - 15q11.2 [CytoView hg38]
Mapping of homologs : NCBISNORD115-12 [Mapview hg19]  SNORD115-12 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SNORD115-12
Alternative Splicing GalleryENSG00000199453
Gene ExpressionSNORD115-12 [ NCBI-GEO ]   SNORD115-12 [ EBI - ARRAY_EXPRESS ]   SNORD115-12 [ SEEK ]   SNORD115-12 [ MEM ]
Gene Expression Viewer (FireBrowse)SNORD115-12 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100033449
GTEX Portal (Tissue expression)SNORD115-12
Human Protein AtlasENSG00000199453-SNORD115-12 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORD115-12
DMDM Disease mutations100033449
Blocks (Seattle)SNORD115-12
Human Protein Atlas [tissue]ENSG00000199453-SNORD115-12 [tissue]
Protein Interaction databases
FunCoupENSG00000199453
BioGRIDSNORD115-12
STRING (EMBL)SNORD115-12
ZODIACSNORD115-12
Ontologies - Pathways
Huge Navigator SNORD115-12 [HugePedia]
snp3D : Map Gene to Disease100033449
BioCentury BCIQSNORD115-12
ClinGenSNORD115-12
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100033449
Chemical/Pharm GKB GenePA162404217
Clinical trialSNORD115-12
Miscellaneous
canSAR (ICR)SNORD115-12 (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNORD115-12
EVEXSNORD115-12
GoPubMedSNORD115-12
iHOPSNORD115-12
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Nov 9 12:29:14 CET 2017

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