Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

SNORD115-3 (small nucleolar RNA, C/D box 115-3)

Identity

Alias_symbol (synonym)HBII-52-3
Other alias
HGNC (Hugo) SNORD115-3
LocusID (NCBI) 100033440
Atlas_Id 73836
Location 15q11.2  [Link to chromosome band 15q11]
Location_base_pair Starts at 25174927 and ends at 25175008 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SNORD115-3   33022
Cards
Entrez_Gene (NCBI)SNORD115-3  100033440  small nucleolar RNA, C/D box 115-3
AliasesHBII-52-3
GeneCards (Weizmann)SNORD115-3
Ensembl hg19 (Hinxton)ENSG00000199970 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000199970 [Gene_View]  chr15:25174927-25175008 [Contig_View]  SNORD115-3 [Vega]
ICGC DataPortalENSG00000199970
TCGA cBioPortalSNORD115-3
AceView (NCBI)SNORD115-3
Genatlas (Paris)SNORD115-3
WikiGenes100033440
SOURCE (Princeton)SNORD115-3
Genetics Home Reference (NIH)SNORD115-3
Genomic and cartography
GoldenPath hg38 (UCSC)SNORD115-3  -     chr15:25174927-25175008 +  15q11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SNORD115-3  -     15q11.2   [Description]    (hg19-Feb_2009)
EnsemblSNORD115-3 - 15q11.2 [CytoView hg19]  SNORD115-3 - 15q11.2 [CytoView hg38]
Mapping of homologs : NCBISNORD115-3 [Mapview hg19]  SNORD115-3 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SNORD115-3
Alternative Splicing GalleryENSG00000199970
Gene ExpressionSNORD115-3 [ NCBI-GEO ]   SNORD115-3 [ EBI - ARRAY_EXPRESS ]   SNORD115-3 [ SEEK ]   SNORD115-3 [ MEM ]
Gene Expression Viewer (FireBrowse)SNORD115-3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100033440
GTEX Portal (Tissue expression)SNORD115-3
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORD115-3
DMDM Disease mutations100033440
Blocks (Seattle)SNORD115-3
Human Protein AtlasENSG00000199970
Protein Interaction databases
FunCoupENSG00000199970
BioGRIDSNORD115-3
STRING (EMBL)SNORD115-3
ZODIACSNORD115-3
Ontologies - Pathways
Huge Navigator SNORD115-3 [HugePedia]
snp3D : Map Gene to Disease100033440
BioCentury BCIQSNORD115-3
ClinGenSNORD115-3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100033440
Chemical/Pharm GKB GenePA162404233
Clinical trialSNORD115-3
Miscellaneous
canSAR (ICR)SNORD115-3 (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNORD115-3
EVEXSNORD115-3
GoPubMedSNORD115-3
iHOPSNORD115-3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri May 19 11:55:12 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.