Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

SNORD115-39 (small nucleolar RNA, C/D box 115-39)

Identity

Alias_symbol (synonym)HBII-52-39
Other alias
HGNC (Hugo) SNORD115-39
LocusID (NCBI) 100033813
Atlas_Id 73846
Location 15q11.2  [Link to chromosome band 15q11]
Location_base_pair Starts at 25241746 and ends at 25241827 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SNORD115-39   33058
Cards
Entrez_Gene (NCBI)SNORD115-39  100033813  small nucleolar RNA, C/D box 115-39
AliasesHBII-52-39
GeneCards (Weizmann)SNORD115-39
Ensembl hg19 (Hinxton)ENSG00000200564 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000200564 [Gene_View]  chr15:25241746-25241827 [Contig_View]  SNORD115-39 [Vega]
ICGC DataPortalENSG00000200564
TCGA cBioPortalSNORD115-39
AceView (NCBI)SNORD115-39
Genatlas (Paris)SNORD115-39
WikiGenes100033813
SOURCE (Princeton)SNORD115-39
Genetics Home Reference (NIH)SNORD115-39
Genomic and cartography
GoldenPath hg38 (UCSC)SNORD115-39  -     chr15:25241746-25241827 +  15q11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SNORD115-39  -     15q11.2   [Description]    (hg19-Feb_2009)
EnsemblSNORD115-39 - 15q11.2 [CytoView hg19]  SNORD115-39 - 15q11.2 [CytoView hg38]
Mapping of homologs : NCBISNORD115-39 [Mapview hg19]  SNORD115-39 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SNORD115-39
Alternative Splicing GalleryENSG00000200564
Gene ExpressionSNORD115-39 [ NCBI-GEO ]   SNORD115-39 [ EBI - ARRAY_EXPRESS ]   SNORD115-39 [ SEEK ]   SNORD115-39 [ MEM ]
Gene Expression Viewer (FireBrowse)SNORD115-39 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100033813
GTEX Portal (Tissue expression)SNORD115-39
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORD115-39
DMDM Disease mutations100033813
Blocks (Seattle)SNORD115-39
Human Protein AtlasENSG00000200564
Protein Interaction databases
FunCoupENSG00000200564
BioGRIDSNORD115-39
STRING (EMBL)SNORD115-39
ZODIACSNORD115-39
Ontologies - Pathways
Huge Navigator SNORD115-39 [HugePedia]
snp3D : Map Gene to Disease100033813
BioCentury BCIQSNORD115-39
ClinGenSNORD115-39
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100033813
Chemical/Pharm GKB GenePA162404243
Clinical trialSNORD115-39
Miscellaneous
canSAR (ICR)SNORD115-39 (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNORD115-39
EVEXSNORD115-39
GoPubMedSNORD115-39
iHOPSNORD115-39
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:39:23 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.