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SNORD116-12 (small nucleolar RNA, C/D box 116-12)

Identity

Alias_symbol (synonym)HBII-85-12
Other alias
HGNC (Hugo) SNORD116-12
LocusID (NCBI) 100033424
Atlas_Id 73866
Location 15q11.2  [Link to chromosome band 15q11]
Location_base_pair Starts at 25077050 and ends at 25077143 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SNORD116-12   33078
Cards
Entrez_Gene (NCBI)SNORD116-12  100033424  small nucleolar RNA, C/D box 116-12
AliasesHBII-85-12
GeneCards (Weizmann)SNORD116-12
Ensembl hg19 (Hinxton)ENSG00000207197 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000207197 [Gene_View]  chr15:25077050-25077143 [Contig_View]  SNORD116-12 [Vega]
ICGC DataPortalENSG00000207197
TCGA cBioPortalSNORD116-12
AceView (NCBI)SNORD116-12
Genatlas (Paris)SNORD116-12
WikiGenes100033424
SOURCE (Princeton)SNORD116-12
Genetics Home Reference (NIH)SNORD116-12
Genomic and cartography
GoldenPath hg38 (UCSC)SNORD116-12  -     chr15:25077050-25077143 +  15q11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SNORD116-12  -     15q11.2   [Description]    (hg19-Feb_2009)
EnsemblSNORD116-12 - 15q11.2 [CytoView hg19]  SNORD116-12 - 15q11.2 [CytoView hg38]
Mapping of homologs : NCBISNORD116-12 [Mapview hg19]  SNORD116-12 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SNORD116-12
Alternative Splicing GalleryENSG00000207197
Gene ExpressionSNORD116-12 [ NCBI-GEO ]   SNORD116-12 [ EBI - ARRAY_EXPRESS ]   SNORD116-12 [ SEEK ]   SNORD116-12 [ MEM ]
Gene Expression Viewer (FireBrowse)SNORD116-12 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100033424
GTEX Portal (Tissue expression)SNORD116-12
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORD116-12
DMDM Disease mutations100033424
Blocks (Seattle)SNORD116-12
Human Protein AtlasENSG00000207197
Protein Interaction databases
FunCoupENSG00000207197
BioGRIDSNORD116-12
STRING (EMBL)SNORD116-12
ZODIACSNORD116-12
Ontologies - Pathways
Huge Navigator SNORD116-12 [HugePedia]
snp3D : Map Gene to Disease100033424
BioCentury BCIQSNORD116-12
ClinGenSNORD116-12
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100033424
Chemical/Pharm GKB GenePA162404259
Clinical trialSNORD116-12
Miscellaneous
canSAR (ICR)SNORD116-12 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNORD116-12
EVEXSNORD116-12
GoPubMedSNORD116-12
iHOPSNORD116-12
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 31 15:42:53 CEST 2017

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