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SNORD116-17 (small nucleolar RNA, C/D box 116-17)

Identity

Alias_symbol (synonym)HBII-85-17
Other alias
HGNC (Hugo) SNORD116-17
LocusID (NCBI) 100033429
Atlas_Id 73871
Location 15q11.2  [Link to chromosome band 15q11]
Location_base_pair Starts at 25328734 and ends at 25328827 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SNORD116-17   33083
Cards
Entrez_Gene (NCBI)SNORD116-17  100033429  small nucleolar RNA, C/D box 116-17
AliasesHBII-85-17
GeneCards (Weizmann)SNORD116-17
Ensembl hg19 (Hinxton)ENSG00000206656 [Gene_View]  chr15:25328734-25328827 [Contig_View]  SNORD116-17 [Vega]
Ensembl hg38 (Hinxton)ENSG00000206656 [Gene_View]  chr15:25328734-25328827 [Contig_View]  SNORD116-17 [Vega]
ICGC DataPortalENSG00000206656
TCGA cBioPortalSNORD116-17
AceView (NCBI)SNORD116-17
Genatlas (Paris)SNORD116-17
WikiGenes100033429
SOURCE (Princeton)SNORD116-17
Genetics Home Reference (NIH)SNORD116-17
Genomic and cartography
GoldenPath hg19 (UCSC)SNORD116-17  -     chr15:25328734-25328827 +  15q11.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)SNORD116-17  -     15q11.2   [Description]    (hg38-Dec_2013)
EnsemblSNORD116-17 - 15q11.2 [CytoView hg19]  SNORD116-17 - 15q11.2 [CytoView hg38]
Mapping of homologs : NCBISNORD116-17 [Mapview hg19]  SNORD116-17 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000015 NC_018926 NG_002690 NT_010194 NW_004929397
Consensus coding sequences : CCDS (NCBI)SNORD116-17
Alternative Splicing GalleryENSG00000206656
Gene ExpressionSNORD116-17 [ NCBI-GEO ]   SNORD116-17 [ EBI - ARRAY_EXPRESS ]   SNORD116-17 [ SEEK ]   SNORD116-17 [ MEM ]
Gene Expression Viewer (FireBrowse)SNORD116-17 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100033429
GTEX Portal (Tissue expression)SNORD116-17
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORD116-17
DMDM Disease mutations100033429
Blocks (Seattle)SNORD116-17
Human Protein AtlasENSG00000206656
Protein Interaction databases
FunCoupENSG00000206656
BioGRIDSNORD116-17
STRING (EMBL)SNORD116-17
ZODIACSNORD116-17
Ontologies - Pathways
Huge Navigator SNORD116-17 [HugePedia]
snp3D : Map Gene to Disease100033429
BioCentury BCIQSNORD116-17
ClinGenSNORD116-17
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100033429
Chemical/Pharm GKB GenePA162404264
Clinical trialSNORD116-17
Miscellaneous
canSAR (ICR)SNORD116-17 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNORD116-17
EVEXSNORD116-17
GoPubMedSNORD116-17
iHOPSNORD116-17
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:45:24 CET 2017

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