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SNORD116-20 (small nucleolar RNA, C/D box 116-20)

Identity

Alias_symbol (synonym)HBII-85-20
Other alias
HGNC (Hugo) SNORD116-20
LocusID (NCBI) 100033431
Atlas_Id 73875
Location 15q11.2  [Link to chromosome band 15q11]
Location_base_pair Starts at 25087661 and ends at 25087754 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SNORD116-20   33086
Cards
Entrez_Gene (NCBI)SNORD116-20  100033431  small nucleolar RNA, C/D box 116-20
AliasesHBII-85-20
GeneCards (Weizmann)SNORD116-20
Ensembl hg19 (Hinxton)ENSG00000278715 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000278715 [Gene_View]  chr15:25087661-25087754 [Contig_View]  SNORD116-20 [Vega]
ICGC DataPortalENSG00000278715
TCGA cBioPortalSNORD116-20
AceView (NCBI)SNORD116-20
Genatlas (Paris)SNORD116-20
WikiGenes100033431
SOURCE (Princeton)SNORD116-20
Genetics Home Reference (NIH)SNORD116-20
Genomic and cartography
GoldenPath hg38 (UCSC)SNORD116-20  -     chr15:25087661-25087754 +  15q11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SNORD116-20  -     15q11.2   [Description]    (hg19-Feb_2009)
EnsemblSNORD116-20 - 15q11.2 [CytoView hg19]  SNORD116-20 - 15q11.2 [CytoView hg38]
Mapping of homologs : NCBISNORD116-20 [Mapview hg19]  SNORD116-20 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SNORD116-20
Alternative Splicing GalleryENSG00000278715
Gene ExpressionSNORD116-20 [ NCBI-GEO ]   SNORD116-20 [ EBI - ARRAY_EXPRESS ]   SNORD116-20 [ SEEK ]   SNORD116-20 [ MEM ]
Gene Expression Viewer (FireBrowse)SNORD116-20 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100033431
GTEX Portal (Tissue expression)SNORD116-20
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORD116-20
DMDM Disease mutations100033431
Blocks (Seattle)SNORD116-20
Human Protein AtlasENSG00000278715
Protein Interaction databases
FunCoupENSG00000278715
BioGRIDSNORD116-20
STRING (EMBL)SNORD116-20
ZODIACSNORD116-20
Ontologies - Pathways
Huge Navigator SNORD116-20 [HugePedia]
snp3D : Map Gene to Disease100033431
BioCentury BCIQSNORD116-20
ClinGenSNORD116-20
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100033431
Chemical/Pharm GKB GenePA162404268
Clinical trialSNORD116-20
Miscellaneous
canSAR (ICR)SNORD116-20 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNORD116-20
EVEXSNORD116-20
GoPubMedSNORD116-20
iHOPSNORD116-20
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri May 19 11:55:21 CEST 2017

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