Atlas of Genetics and Cytogenetics in Oncology and Haematology


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SNORD116-22 (small nucleolar RNA, C/D box 116-22)

Identity

Alias_symbol (synonym)HBII-85-22
Other alias
HGNC (Hugo) SNORD116-22
LocusID (NCBI) 100033433
Atlas_Id 73877
Location 15q11.2  [Link to chromosome band 15q11]
Location_base_pair Starts at 25335069 and ends at 25335162 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SNORD116-22   33088
Cards
Entrez_Gene (NCBI)SNORD116-22  100033433  small nucleolar RNA, C/D box 116-22
AliasesHBII-85-22
GeneCards (Weizmann)SNORD116-22
Ensembl hg19 (Hinxton)ENSG00000275127 [Gene_View]  chr15:25335069-25335162 [Contig_View]  SNORD116-22 [Vega]
Ensembl hg38 (Hinxton)ENSG00000275127 [Gene_View]  chr15:25335069-25335162 [Contig_View]  SNORD116-22 [Vega]
ICGC DataPortalENSG00000275127
TCGA cBioPortalSNORD116-22
AceView (NCBI)SNORD116-22
Genatlas (Paris)SNORD116-22
WikiGenes100033433
SOURCE (Princeton)SNORD116-22
Genetics Home Reference (NIH)SNORD116-22
Genomic and cartography
GoldenPath hg19 (UCSC)SNORD116-22  -     chr15:25335069-25335162 +  15q11.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)SNORD116-22  -     15q11.2   [Description]    (hg38-Dec_2013)
EnsemblSNORD116-22 - 15q11.2 [CytoView hg19]  SNORD116-22 - 15q11.2 [CytoView hg38]
Mapping of homologs : NCBISNORD116-22 [Mapview hg19]  SNORD116-22 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000015 NC_018926 NG_002690 NT_010194 NW_004929397
Consensus coding sequences : CCDS (NCBI)SNORD116-22
Alternative Splicing GalleryENSG00000275127
Gene ExpressionSNORD116-22 [ NCBI-GEO ]   SNORD116-22 [ EBI - ARRAY_EXPRESS ]   SNORD116-22 [ SEEK ]   SNORD116-22 [ MEM ]
Gene Expression Viewer (FireBrowse)SNORD116-22 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100033433
GTEX Portal (Tissue expression)SNORD116-22
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORD116-22
DMDM Disease mutations100033433
Blocks (Seattle)SNORD116-22
Human Protein AtlasENSG00000275127
Protein Interaction databases
FunCoupENSG00000275127
BioGRIDSNORD116-22
STRING (EMBL)SNORD116-22
ZODIACSNORD116-22
Ontologies - Pathways
Huge Navigator SNORD116-22 [HugePedia]
snp3D : Map Gene to Disease100033433
BioCentury BCIQSNORD116-22
ClinGenSNORD116-22
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100033433
Chemical/Pharm GKB GenePA162404270
Clinical trialSNORD116-22
Miscellaneous
canSAR (ICR)SNORD116-22 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNORD116-22
EVEXSNORD116-22
GoPubMedSNORD116-22
iHOPSNORD116-22
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:45:25 CET 2017

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