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SNORD116-24 (small nucleolar RNA, C/D box 116-24)

Identity

Alias_symbol (synonym)HBII-85-24
Other alias
HGNC (Hugo) SNORD116-24
LocusID (NCBI) 100033435
Atlas_Id 73879
Location 15q11.2  [Link to chromosome band 15q11]
Location_base_pair Starts at 25094036 and ends at 25094129 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SNORD116-24   33090
Cards
Entrez_Gene (NCBI)SNORD116-24  100033435  small nucleolar RNA, C/D box 116-24
AliasesHBII-85-24
GeneCards (Weizmann)SNORD116-24
Ensembl hg19 (Hinxton)ENSG00000207279 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000207279 [Gene_View]  chr15:25094036-25094129 [Contig_View]  SNORD116-24 [Vega]
ICGC DataPortalENSG00000207279
TCGA cBioPortalSNORD116-24
AceView (NCBI)SNORD116-24
Genatlas (Paris)SNORD116-24
WikiGenes100033435
SOURCE (Princeton)SNORD116-24
Genetics Home Reference (NIH)SNORD116-24
Genomic and cartography
GoldenPath hg38 (UCSC)SNORD116-24  -     chr15:25094036-25094129 +  15q11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SNORD116-24  -     15q11.2   [Description]    (hg19-Feb_2009)
EnsemblSNORD116-24 - 15q11.2 [CytoView hg19]  SNORD116-24 - 15q11.2 [CytoView hg38]
Mapping of homologs : NCBISNORD116-24 [Mapview hg19]  SNORD116-24 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SNORD116-24
Alternative Splicing GalleryENSG00000207279
Gene ExpressionSNORD116-24 [ NCBI-GEO ]   SNORD116-24 [ EBI - ARRAY_EXPRESS ]   SNORD116-24 [ SEEK ]   SNORD116-24 [ MEM ]
Gene Expression Viewer (FireBrowse)SNORD116-24 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100033435
GTEX Portal (Tissue expression)SNORD116-24
Human Protein AtlasENSG00000207279-SNORD116-24 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORD116-24
DMDM Disease mutations100033435
Blocks (Seattle)SNORD116-24
Human Protein Atlas [tissue]ENSG00000207279-SNORD116-24 [tissue]
Protein Interaction databases
FunCoupENSG00000207279
BioGRIDSNORD116-24
STRING (EMBL)SNORD116-24
ZODIACSNORD116-24
Ontologies - Pathways
Huge Navigator SNORD116-24 [HugePedia]
snp3D : Map Gene to Disease100033435
BioCentury BCIQSNORD116-24
ClinGenSNORD116-24
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100033435
Chemical/Pharm GKB GenePA162404272
Clinical trialSNORD116-24
Miscellaneous
canSAR (ICR)SNORD116-24 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNORD116-24
EVEXSNORD116-24
GoPubMedSNORD116-24
iHOPSNORD116-24
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 13:32:26 CET 2017

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