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SNORD116-28 (small nucleolar RNA, C/D box 116-28)

Identity

Alias_symbol (synonym)HBII-85-28
Other alias
HGNC (Hugo) SNORD116-28
LocusID (NCBI) 100033820
Atlas_Id 73883
Location 15q11.2  [Link to chromosome band 15q11]
Location_base_pair Starts at 25104641 and ends at 25104733 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SNORD116-28   33347
Cards
Entrez_Gene (NCBI)SNORD116-28  100033820  small nucleolar RNA, C/D box 116-28
AliasesHBII-85-28
GeneCards (Weizmann)SNORD116-28
Ensembl hg19 (Hinxton)ENSG00000278123 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000278123 [Gene_View]  chr15:25104641-25104733 [Contig_View]  SNORD116-28 [Vega]
ICGC DataPortalENSG00000278123
TCGA cBioPortalSNORD116-28
AceView (NCBI)SNORD116-28
Genatlas (Paris)SNORD116-28
WikiGenes100033820
SOURCE (Princeton)SNORD116-28
Genetics Home Reference (NIH)SNORD116-28
Genomic and cartography
GoldenPath hg38 (UCSC)SNORD116-28  -     chr15:25104641-25104733 +  15q11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SNORD116-28  -     15q11.2   [Description]    (hg19-Feb_2009)
EnsemblSNORD116-28 - 15q11.2 [CytoView hg19]  SNORD116-28 - 15q11.2 [CytoView hg38]
Mapping of homologs : NCBISNORD116-28 [Mapview hg19]  SNORD116-28 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SNORD116-28
Alternative Splicing GalleryENSG00000278123
Gene ExpressionSNORD116-28 [ NCBI-GEO ]   SNORD116-28 [ EBI - ARRAY_EXPRESS ]   SNORD116-28 [ SEEK ]   SNORD116-28 [ MEM ]
Gene Expression Viewer (FireBrowse)SNORD116-28 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100033820
GTEX Portal (Tissue expression)SNORD116-28
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORD116-28
DMDM Disease mutations100033820
Blocks (Seattle)SNORD116-28
Human Protein AtlasENSG00000278123
Protein Interaction databases
FunCoupENSG00000278123
BioGRIDSNORD116-28
STRING (EMBL)SNORD116-28
ZODIACSNORD116-28
Ontologies - Pathways
Huge Navigator SNORD116-28 [HugePedia]
snp3D : Map Gene to Disease100033820
BioCentury BCIQSNORD116-28
ClinGenSNORD116-28
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100033820
Chemical/Pharm GKB GenePA162404276
Clinical trialSNORD116-28
Miscellaneous
canSAR (ICR)SNORD116-28 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNORD116-28
EVEXSNORD116-28
GoPubMedSNORD116-28
iHOPSNORD116-28
Genes in titleautomatic searci in PufMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:39:28 CEST 2017

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