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SNORD116-3 (small nucleolar RNA, C/D box 116-3)

Identity

Alias_symbol (synonym)HBII-85-3
Other alias
HGNC (Hugo) SNORD116-3
LocusID (NCBI) 100033415
Atlas_Id 73885
Location 15q11.2  [Link to chromosome band 15q11]
Location_base_pair Starts at 25302006 and ends at 25302102 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SNORD116-3   33069
Cards
Entrez_Gene (NCBI)SNORD116-3  100033415  small nucleolar RNA, C/D box 116-3
AliasesHBII-85-3
GeneCards (Weizmann)SNORD116-3
Ensembl hg19 (Hinxton)ENSG00000207014 [Gene_View]  chr15:25302006-25302102 [Contig_View]  SNORD116-3 [Vega]
Ensembl hg38 (Hinxton)ENSG00000207014 [Gene_View]  chr15:25302006-25302102 [Contig_View]  SNORD116-3 [Vega]
ICGC DataPortalENSG00000207014
TCGA cBioPortalSNORD116-3
AceView (NCBI)SNORD116-3
Genatlas (Paris)SNORD116-3
WikiGenes100033415
SOURCE (Princeton)SNORD116-3
Genetics Home Reference (NIH)SNORD116-3
Genomic and cartography
GoldenPath hg19 (UCSC)SNORD116-3  -     chr15:25302006-25302102 +  15q11.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)SNORD116-3  -     15q11.2   [Description]    (hg38-Dec_2013)
EnsemblSNORD116-3 - 15q11.2 [CytoView hg19]  SNORD116-3 - 15q11.2 [CytoView hg38]
Mapping of homologs : NCBISNORD116-3 [Mapview hg19]  SNORD116-3 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000015 NC_018926 NG_002690 NT_010194 NW_004929397
Consensus coding sequences : CCDS (NCBI)SNORD116-3
Alternative Splicing GalleryENSG00000207014
Gene ExpressionSNORD116-3 [ NCBI-GEO ]   SNORD116-3 [ EBI - ARRAY_EXPRESS ]   SNORD116-3 [ SEEK ]   SNORD116-3 [ MEM ]
Gene Expression Viewer (FireBrowse)SNORD116-3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100033415
GTEX Portal (Tissue expression)SNORD116-3
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORD116-3
DMDM Disease mutations100033415
Blocks (Seattle)SNORD116-3
Human Protein AtlasENSG00000207014
Protein Interaction databases
FunCoupENSG00000207014
BioGRIDSNORD116-3
STRING (EMBL)SNORD116-3
ZODIACSNORD116-3
Ontologies - Pathways
Huge Navigator SNORD116-3 [HugePedia]
snp3D : Map Gene to Disease100033415
BioCentury BCIQSNORD116-3
ClinGenSNORD116-3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100033415
Chemical/Pharm GKB GenePA162404278
Clinical trialSNORD116-3
Miscellaneous
canSAR (ICR)SNORD116-3 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNORD116-3
EVEXSNORD116-3
GoPubMedSNORD116-3
iHOPSNORD116-3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Tue Mar 14 12:45:27 CET 2017

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