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SNORD116-5 (small nucleolar RNA, C/D box 116-5)

Identity

Alias_symbol (synonym)HBII-85-5
Other alias
HGNC (Hugo) SNORD116-5
LocusID (NCBI) 100033417
Atlas_Id 73888
Location 15q11.2  [Link to chromosome band 15q11]
Location_base_pair Starts at 25062332 and ends at 25062428 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SNORD116-5   33071
Cards
Entrez_Gene (NCBI)SNORD116-5  100033417  small nucleolar RNA, C/D box 116-5
AliasesHBII-85-5
GeneCards (Weizmann)SNORD116-5
Ensembl hg19 (Hinxton)ENSG00000207191 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000207191 [Gene_View]  chr15:25062332-25062428 [Contig_View]  SNORD116-5 [Vega]
ICGC DataPortalENSG00000207191
TCGA cBioPortalSNORD116-5
AceView (NCBI)SNORD116-5
Genatlas (Paris)SNORD116-5
WikiGenes100033417
SOURCE (Princeton)SNORD116-5
Genetics Home Reference (NIH)SNORD116-5
Genomic and cartography
GoldenPath hg38 (UCSC)SNORD116-5  -     chr15:25062332-25062428 +  15q11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SNORD116-5  -     15q11.2   [Description]    (hg19-Feb_2009)
EnsemblSNORD116-5 - 15q11.2 [CytoView hg19]  SNORD116-5 - 15q11.2 [CytoView hg38]
Mapping of homologs : NCBISNORD116-5 [Mapview hg19]  SNORD116-5 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SNORD116-5
Alternative Splicing GalleryENSG00000207191
Gene ExpressionSNORD116-5 [ NCBI-GEO ]   SNORD116-5 [ EBI - ARRAY_EXPRESS ]   SNORD116-5 [ SEEK ]   SNORD116-5 [ MEM ]
Gene Expression Viewer (FireBrowse)SNORD116-5 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100033417
GTEX Portal (Tissue expression)SNORD116-5
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORD116-5
DMDM Disease mutations100033417
Blocks (Seattle)SNORD116-5
Human Protein AtlasENSG00000207191
Protein Interaction databases
FunCoupENSG00000207191
BioGRIDSNORD116-5
STRING (EMBL)SNORD116-5
ZODIACSNORD116-5
Ontologies - Pathways
Huge Navigator SNORD116-5 [HugePedia]
snp3D : Map Gene to Disease100033417
BioCentury BCIQSNORD116-5
ClinGenSNORD116-5
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100033417
Chemical/Pharm GKB GenePA162404280
Clinical trialSNORD116-5
Miscellaneous
canSAR (ICR)SNORD116-5 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNORD116-5
EVEXSNORD116-5
GoPubMedSNORD116-5
iHOPSNORD116-5
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:39:29 CEST 2017

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