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SNORD116-9 (small nucleolar RNA, C/D box 116-9)

Identity

Alias_symbol (synonym)HBII-85-9
Other alias
HGNC (Hugo) SNORD116-9
LocusID (NCBI) 100033421
Atlas_Id 73892
Location 15q11.2  [Link to chromosome band 15q11]
Location_base_pair Starts at 25056859 and ends at 25056955 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SNORD116-9   33075
Cards
Entrez_Gene (NCBI)SNORD116-9  100033421  small nucleolar RNA, C/D box 116-9
AliasesHBII-85-9
GeneCards (Weizmann)SNORD116-9
Ensembl hg19 (Hinxton)ENSG00000206727 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000206727 [Gene_View]  chr15:25056859-25056955 [Contig_View]  SNORD116-9 [Vega]
ICGC DataPortalENSG00000206727
TCGA cBioPortalSNORD116-9
AceView (NCBI)SNORD116-9
Genatlas (Paris)SNORD116-9
WikiGenes100033421
SOURCE (Princeton)SNORD116-9
Genetics Home Reference (NIH)SNORD116-9
Genomic and cartography
GoldenPath hg38 (UCSC)SNORD116-9  -     chr15:25056859-25056955 +  15q11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SNORD116-9  -     15q11.2   [Description]    (hg19-Feb_2009)
EnsemblSNORD116-9 - 15q11.2 [CytoView hg19]  SNORD116-9 - 15q11.2 [CytoView hg38]
Mapping of homologs : NCBISNORD116-9 [Mapview hg19]  SNORD116-9 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SNORD116-9
Alternative Splicing GalleryENSG00000206727
Gene ExpressionSNORD116-9 [ NCBI-GEO ]   SNORD116-9 [ EBI - ARRAY_EXPRESS ]   SNORD116-9 [ SEEK ]   SNORD116-9 [ MEM ]
Gene Expression Viewer (FireBrowse)SNORD116-9 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100033421
GTEX Portal (Tissue expression)SNORD116-9
Human Protein AtlasENSG00000206727-SNORD116-9 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORD116-9
DMDM Disease mutations100033421
Blocks (Seattle)SNORD116-9
Human Protein Atlas [tissue]ENSG00000206727-SNORD116-9 [tissue]
Protein Interaction databases
FunCoupENSG00000206727
BioGRIDSNORD116-9
STRING (EMBL)SNORD116-9
ZODIACSNORD116-9
Ontologies - Pathways
Huge Navigator SNORD116-9 [HugePedia]
snp3D : Map Gene to Disease100033421
BioCentury BCIQSNORD116-9
ClinGenSNORD116-9
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100033421
Chemical/Pharm GKB GenePA162404284
Clinical trialSNORD116-9
Miscellaneous
canSAR (ICR)SNORD116-9 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNORD116-9
EVEXSNORD116-9
GoPubMedSNORD116-9
iHOPSNORD116-9
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Nov 9 12:29:30 CET 2017

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