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SNORD116@ (small nucleolar RNA, C/D box 116 cluster)

Identity

Alias (NCBI)HBII-85
PET1
PWCR1
HGNC (Hugo) SNORD116@
HGNC Alias symbHBII-85
PET1
HGNC Previous namePWCR1
HGNC Previous namePrader-Willi syndrome chromosome region 1
LocusID (NCBI) 692236
Atlas_Id 73862
Location 15q11.2  [Link to chromosome band 15q11]
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)SNORD116@   32781
Cards
Entrez_Gene (NCBI)SNORD116@  692236  small nucleolar RNA, C/D box 116 cluster
AliasesHBII-85; PET1; PWCR1
GeneCards (Weizmann)SNORD116@
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  - [Contig_View]  SNORD116@ [Vega]
TCGA cBioPortalSNORD116@
AceView (NCBI)SNORD116@
Genatlas (Paris)SNORD116@
WikiGenes692236
SOURCE (Princeton)SNORD116@
Genetics Home Reference (NIH)SNORD116@
Genomic and cartography
GoldenPath hg38 (UCSC)SNORD116@  -  
GoldenPath hg19 (UCSC)SNORD116@  -  
GoldenPathSNORD116@ - [CytoView hg19]  SNORD116@ - [CytoView hg38]
genome Data Viewer NCBISNORD116@ [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AF241255
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SNORD116@
Gene ExpressionSNORD116@ [ NCBI-GEO ]   SNORD116@ [ EBI - ARRAY_EXPRESS ]   SNORD116@ [ SEEK ]   SNORD116@ [ MEM ]
Gene Expression Viewer (FireBrowse)SNORD116@ [ Firebrowse - Broad ]
GenevisibleExpression of SNORD116@ in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)692236
GTEX Portal (Tissue expression)SNORD116@
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORD116@
DMDM Disease mutations692236
Blocks (Seattle)SNORD116@
IPIIPI00929371   
Protein Interaction databases
BioGRIDSNORD116@
STRING (EMBL)SNORD116@
ZODIACSNORD116@
Ontologies - Pathways
Huge Navigator SNORD116@ [HugePedia]
snp3D : Map Gene to Disease692236
BioCentury BCIQSNORD116@
ClinGenSNORD116@
Clinical trials, drugs, therapy
Protein Interactions : CTD692236
Pharm GKB GenePA145007734
Clinical trialSNORD116@
Miscellaneous
canSAR (ICR)SNORD116@ (select the gene name)
HarmonizomeSNORD116@
DataMed IndexSNORD116@
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNORD116@
EVEXSNORD116@
GoPubMedSNORD116@
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Jul 16 16:29:49 CEST 2020

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