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SNORD116@ (small nucleolar RNA, C/D box 116 cluster)

Identity

Alias_namesPWCR1
Prader-Willi syndrome chromosome region 1
Alias_symbol (synonym)HBII-85
PET1
Other alias
HGNC (Hugo) SNORD116@
LocusID (NCBI) 692236
Atlas_Id 73862
Location 15q11.2  [Link to chromosome band 15q11]
Location_base_pair Starts at 25087661 and ends at 25088896 bp from pter ( according to hg38-Dec_2013)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)SNORD116@   32781
Cards
Entrez_Gene (NCBI)SNORD116@  692236  small nucleolar RNA, C/D box 116 cluster
AliasesHBII-85; PET1; PWCR1
GeneCards (Weizmann)SNORD116@
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr15:25087661-25088896 [Contig_View]  SNORD116@ [Vega]
TCGA cBioPortalSNORD116@
AceView (NCBI)SNORD116@
Genatlas (Paris)SNORD116@
WikiGenes692236
SOURCE (Princeton)SNORD116@
Genetics Home Reference (NIH)SNORD116@
Genomic and cartography
GoldenPath hg38 (UCSC)SNORD116@  -     chr15:25087661-25088896 +  15q11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SNORD116@  -     15q11.2   [Description]    (hg19-Feb_2009)
EnsemblSNORD116@ - 15q11.2 [CytoView hg19]  SNORD116@ - 15q11.2 [CytoView hg38]
Mapping of homologs : NCBISNORD116@ [Mapview hg19]  SNORD116@ [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF241255
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SNORD116@
Cluster EST : UnigeneHs.555970 [ NCBI ]
CGAP (NCI)Hs.555970
Gene ExpressionSNORD116@ [ NCBI-GEO ]   SNORD116@ [ EBI - ARRAY_EXPRESS ]   SNORD116@ [ SEEK ]   SNORD116@ [ MEM ]
Gene Expression Viewer (FireBrowse)SNORD116@ [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)692236
GTEX Portal (Tissue expression)SNORD116@
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORD116@
DMDM Disease mutations692236
Blocks (Seattle)SNORD116@
IPIIPI00929371   
Protein Interaction databases
BioGRIDSNORD116@
STRING (EMBL)SNORD116@
ZODIACSNORD116@
Ontologies - Pathways
Huge Navigator SNORD116@ [HugePedia]
snp3D : Map Gene to Disease692236
BioCentury BCIQSNORD116@
ClinGenSNORD116@
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD692236
Chemical/Pharm GKB GenePA145007734
Clinical trialSNORD116@
Miscellaneous
canSAR (ICR)SNORD116@ (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNORD116@
EVEXSNORD116@
GoPubMedSNORD116@
iHOPSNORD116@
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 31 15:42:52 CEST 2017

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