Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

SNORD118 (small nucleolar RNA, C/D box 118)

Identity

Alias_symbol (synonym)U8
Other aliasLCC
HGNC (Hugo) SNORD118
LocusID (NCBI) 727676
Atlas_Id 80021
Location 17p13.1  [Link to chromosome band 17p13]
Location_base_pair Starts at 8173453 and ends at 8173588 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SNORD118   32952
Cards
Entrez_Gene (NCBI)SNORD118  727676  small nucleolar RNA, C/D box 118
AliasesLCC; U8
GeneCards (Weizmann)SNORD118
Ensembl hg19 (Hinxton)ENSG00000200463 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000200463 [Gene_View]  chr17:8173453-8173588 [Contig_View]  SNORD118 [Vega]
ICGC DataPortalENSG00000200463
TCGA cBioPortalSNORD118
AceView (NCBI)SNORD118
Genatlas (Paris)SNORD118
WikiGenes727676
SOURCE (Princeton)SNORD118
Genetics Home Reference (NIH)SNORD118
Genomic and cartography
GoldenPath hg38 (UCSC)SNORD118  -     chr17:8173453-8173588 -  17p13.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SNORD118  -     17p13.1   [Description]    (hg19-Feb_2009)
EnsemblSNORD118 - 17p13.1 [CytoView hg19]  SNORD118 - 17p13.1 [CytoView hg38]
Mapping of homologs : NCBISNORD118 [Mapview hg19]  SNORD118 [Mapview hg38]
OMIM614561   616663   
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SNORD118
Alternative Splicing GalleryENSG00000200463
Gene ExpressionSNORD118 [ NCBI-GEO ]   SNORD118 [ EBI - ARRAY_EXPRESS ]   SNORD118 [ SEEK ]   SNORD118 [ MEM ]
Gene Expression Viewer (FireBrowse)SNORD118 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)727676
GTEX Portal (Tissue expression)SNORD118
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORD118
DMDM Disease mutations727676
Blocks (Seattle)SNORD118
Human Protein AtlasENSG00000200463
Protein Interaction databases
FunCoupENSG00000200463
BioGRIDSNORD118
STRING (EMBL)SNORD118
ZODIACSNORD118
Ontologies - Pathways
Huge Navigator SNORD118 [HugePedia]
snp3D : Map Gene to Disease727676
BioCentury BCIQSNORD118
ClinGenSNORD118
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD727676
Chemical/Pharm GKB GenePA145148066
Clinical trialSNORD118
Miscellaneous
canSAR (ICR)SNORD118 (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNORD118
EVEXSNORD118
GoPubMedSNORD118
iHOPSNORD118
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:39:30 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.