Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

SNORD12 (small nucleolar RNA, C/D box 12)

Identity

Alias_namesMIR1259
MIRN1259
microRNA 1259
Alias_symbol (synonym)HBII-99
hsa-mir-1259
Other alias
HGNC (Hugo) SNORD12
LocusID (NCBI) 692057
Atlas_Id 73896
Location 20q13.13  [Link to chromosome band 20q13]
Location_base_pair Starts at 47897220 and ends at 47897309 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SNORD12   32708
Cards
Entrez_Gene (NCBI)SNORD12  692057  small nucleolar RNA, C/D box 12
AliasesHBII-99; MIR1259; MIRN1259
GeneCards (Weizmann)SNORD12
Ensembl hg19 (Hinxton)ENSG00000212304 [Gene_View]  chr20:47897220-47897309 [Contig_View]  SNORD12 [Vega]
Ensembl hg38 (Hinxton)ENSG00000212304 [Gene_View]  chr20:47897220-47897309 [Contig_View]  SNORD12 [Vega]
ICGC DataPortalENSG00000212304
TCGA cBioPortalSNORD12
AceView (NCBI)SNORD12
Genatlas (Paris)SNORD12
WikiGenes692057
SOURCE (Princeton)SNORD12
Genetics Home Reference (NIH)SNORD12
Genomic and cartography
GoldenPath hg19 (UCSC)SNORD12  -     chr20:47897220-47897309 +  20q13.13   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)SNORD12  -     20q13.13   [Description]    (hg38-Dec_2013)
EnsemblSNORD12 - 20q13.13 [CytoView hg19]  SNORD12 - 20q13.13 [CytoView hg38]
Mapping of homologs : NCBISNORD12 [Mapview hg19]  SNORD12 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000020 NC_018931 NT_011362 NW_004929418
Consensus coding sequences : CCDS (NCBI)SNORD12
Alternative Splicing GalleryENSG00000212304
Gene ExpressionSNORD12 [ NCBI-GEO ]   SNORD12 [ EBI - ARRAY_EXPRESS ]   SNORD12 [ SEEK ]   SNORD12 [ MEM ]
Gene Expression Viewer (FireBrowse)SNORD12 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)692057
GTEX Portal (Tissue expression)SNORD12
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORD12
DMDM Disease mutations692057
Blocks (Seattle)SNORD12
Human Protein AtlasENSG00000212304
Protein Interaction databases
FunCoupENSG00000212304
BioGRIDSNORD12
STRING (EMBL)SNORD12
ZODIACSNORD12
Ontologies - Pathways
Huge Navigator SNORD12 [HugePedia]
snp3D : Map Gene to Disease692057
BioCentury BCIQSNORD12
ClinGenSNORD12
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD692057
Chemical/Pharm GKB GenePA145007809
Clinical trialSNORD12
Miscellaneous
canSAR (ICR)SNORD12 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNORD12
EVEXSNORD12
GoPubMedSNORD12
iHOPSNORD12
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:45:29 CET 2017

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.