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SNORD13 (small nucleolar RNA, C/D box 13)

Identity

Alias_symbol (synonym)U13
RNU13
SNORD13A
Other alias
HGNC (Hugo) SNORD13
LocusID (NCBI) 692084
Atlas_Id 79466
Location 8p12  [Link to chromosome band 8p12]
Location_base_pair Starts at 33513475 and ends at 33513578 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SNORD13   32711
Cards
Entrez_Gene (NCBI)SNORD13  692084  small nucleolar RNA, C/D box 13
AliasesRNU13; SNORD13A; U13
GeneCards (Weizmann)SNORD13
Ensembl hg19 (Hinxton)ENSG00000239039 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000239039 [Gene_View]  chr8:33513475-33513578 [Contig_View]  SNORD13 [Vega]
ICGC DataPortalENSG00000239039
TCGA cBioPortalSNORD13
AceView (NCBI)SNORD13
Genatlas (Paris)SNORD13
WikiGenes692084
SOURCE (Princeton)SNORD13
Genetics Home Reference (NIH)SNORD13
Genomic and cartography
GoldenPath hg38 (UCSC)SNORD13  -     chr8:33513475-33513578 +  8p12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SNORD13  -     8p12   [Description]    (hg19-Feb_2009)
EnsemblSNORD13 - 8p12 [CytoView hg19]  SNORD13 - 8p12 [CytoView hg38]
Mapping of homologs : NCBISNORD13 [Mapview hg19]  SNORD13 [Mapview hg38]
OMIM616664   
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SNORD13
Alternative Splicing GalleryENSG00000239039
Gene ExpressionSNORD13 [ NCBI-GEO ]   SNORD13 [ EBI - ARRAY_EXPRESS ]   SNORD13 [ SEEK ]   SNORD13 [ MEM ]
Gene Expression Viewer (FireBrowse)SNORD13 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)692084
GTEX Portal (Tissue expression)SNORD13
Human Protein AtlasENSG00000239039-SNORD13 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORD13
DMDM Disease mutations692084
Blocks (Seattle)SNORD13
Human Protein Atlas [tissue]ENSG00000239039-SNORD13 [tissue]
Protein Interaction databases
FunCoupENSG00000239039
BioGRIDSNORD13
STRING (EMBL)SNORD13
ZODIACSNORD13
Ontologies - Pathways
Huge Navigator SNORD13 [HugePedia]
snp3D : Map Gene to Disease692084
BioCentury BCIQSNORD13
ClinGenSNORD13
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD692084
Chemical/Pharm GKB GenePA145007810
Clinical trialSNORD13
Miscellaneous
canSAR (ICR)SNORD13 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNORD13
EVEXSNORD13
GoPubMedSNORD13
iHOPSNORD13
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:19:00 CET 2017

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