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SNORD130 (small nucleolar RNA, C/D box 130)

Identity

Other alias-
HGNC (Hugo) SNORD130
LocusID (NCBI) 106635548
Atlas_Id 78004
Location 10p12.1  [Link to chromosome band 10p12]
Location_base_pair Starts at 28073237 and ends at 28073378 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SNORD130   50411
Cards
Entrez_Gene (NCBI)SNORD130  106635548  small nucleolar RNA, C/D box 130
Aliases
GeneCards (Weizmann)SNORD130
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr10:28073237-28073378 [Contig_View]  SNORD130 [Vega]
TCGA cBioPortalSNORD130
AceView (NCBI)SNORD130
Genatlas (Paris)SNORD130
WikiGenes106635548
SOURCE (Princeton)SNORD130
Genetics Home Reference (NIH)SNORD130
Genomic and cartography
GoldenPath hg38 (UCSC)SNORD130  -     chr10:28073237-28073378 -  10p12.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SNORD130  -     10p12.1   [Description]    (hg19-Feb_2009)
EnsemblSNORD130 - 10p12.1 [CytoView hg19]  SNORD130 - 10p12.1 [CytoView hg38]
Mapping of homologs : NCBISNORD130 [Mapview hg19]  SNORD130 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SNORD130
Gene ExpressionSNORD130 [ NCBI-GEO ]   SNORD130 [ EBI - ARRAY_EXPRESS ]   SNORD130 [ SEEK ]   SNORD130 [ MEM ]
Gene Expression Viewer (FireBrowse)SNORD130 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)106635548
GTEX Portal (Tissue expression)SNORD130
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORD130
DMDM Disease mutations106635548
Blocks (Seattle)SNORD130
Protein Interaction databases
BioGRIDSNORD130
STRING (EMBL)SNORD130
ZODIACSNORD130
Ontologies - Pathways
Huge Navigator SNORD130 [HugePedia]
snp3D : Map Gene to Disease106635548
BioCentury BCIQSNORD130
ClinGenSNORD130
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD106635548
Clinical trialSNORD130
Miscellaneous
canSAR (ICR)SNORD130 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNORD130
EVEXSNORD130
GoPubMedSNORD130
iHOPSNORD130
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 12:29:33 CET 2017

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