Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

SNORD13B-1 (small nucleolar RNA, C/D box 13B-1)

Identity

Alias (NCBI)-
HGNC (Hugo) SNORD13B-1
LocusID (NCBI) 109617019
Atlas_Id 79869
Location 5q13.2  [Link to chromosome band 5q13]
Location_base_pair Starts at 69539161 and ends at 69539264 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)SNORD13B-1   52250
Cards
Entrez_Gene (NCBI)SNORD13B-1    small nucleolar RNA, C/D box 13B-1
Aliases
GeneCards (Weizmann)SNORD13B-1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr5:69539161-69539264 [Contig_View]  SNORD13B-1 [Vega]
TCGA cBioPortalSNORD13B-1
AceView (NCBI)SNORD13B-1
Genatlas (Paris)SNORD13B-1
SOURCE (Princeton)SNORD13B-1
Genetics Home Reference (NIH)SNORD13B-1
Genomic and cartography
GoldenPath hg38 (UCSC)SNORD13B-1  -     chr5:69539161-69539264 -  5q13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SNORD13B-1  -     5q13.2   [Description]    (hg19-Feb_2009)
GoldenPathSNORD13B-1 - 5q13.2 [CytoView hg19]  SNORD13B-1 - 5q13.2 [CytoView hg38]
Genome Data Viewer NCBISNORD13B-1 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)SNORD13B-1
Gene ExpressionSNORD13B-1 [ NCBI-GEO ]   SNORD13B-1 [ EBI - ARRAY_EXPRESS ]   SNORD13B-1 [ SEEK ]   SNORD13B-1 [ MEM ]
Gene Expression Viewer (FireBrowse)SNORD13B-1 [ Firebrowse - Broad ]
GenevisibleExpression of SNORD13B-1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)109617019
GTEX Portal (Tissue expression)SNORD13B-1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORD13B-1
Protein Interaction databases
BioGRIDSNORD13B-1
STRING (EMBL)SNORD13B-1
ZODIACSNORD13B-1
Ontologies - Pathways
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXSNORD13B-1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Sun Jan 16 19:26:24 CET 2022

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.