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SNORD13C (small nucleolar RNA, C/D box 13C)

Identity

Other alias-
HGNC (Hugo) SNORD13C
LocusID (NCBI) 109616989
Atlas_Id 79293
Location 1q21.2  [Link to chromosome band 1q21]
Location_base_pair Starts at 150261694 and ends at 150261797 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SNORD13C   52252
Cards
Entrez_Gene (NCBI)SNORD13C  109616989  small nucleolar RNA, C/D box 13C
Aliases
GeneCards (Weizmann)SNORD13C
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr1:150261694-150261797 [Contig_View]  SNORD13C [Vega]
TCGA cBioPortalSNORD13C
AceView (NCBI)SNORD13C
Genatlas (Paris)SNORD13C
WikiGenes109616989
SOURCE (Princeton)SNORD13C
Genetics Home Reference (NIH)SNORD13C
Genomic and cartography
GoldenPath hg38 (UCSC)SNORD13C  -     chr1:150261694-150261797 +  1q21.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SNORD13C  -     1q21.2   [Description]    (hg19-Feb_2009)
EnsemblSNORD13C - 1q21.2 [CytoView hg19]  SNORD13C - 1q21.2 [CytoView hg38]
Mapping of homologs : NCBISNORD13C [Mapview hg19]  SNORD13C [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SNORD13C
Gene ExpressionSNORD13C [ NCBI-GEO ]   SNORD13C [ EBI - ARRAY_EXPRESS ]   SNORD13C [ SEEK ]   SNORD13C [ MEM ]
Gene Expression Viewer (FireBrowse)SNORD13C [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)109616989
GTEX Portal (Tissue expression)SNORD13C
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORD13C
DMDM Disease mutations109616989
Blocks (Seattle)SNORD13C
Protein Interaction databases
BioGRIDSNORD13C
STRING (EMBL)SNORD13C
ZODIACSNORD13C
Ontologies - Pathways
Huge Navigator SNORD13C [HugePedia]
snp3D : Map Gene to Disease109616989
BioCentury BCIQSNORD13C
ClinGenSNORD13C
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD109616989
Clinical trialSNORD13C
Miscellaneous
canSAR (ICR)SNORD13C (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNORD13C
EVEXSNORD13C
GoPubMedSNORD13C
iHOPSNORD13C
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:03:04 CET 2017

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