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SNORD13J (small nucleolar RNA, C/D box 13J)

Identity

Other alias-
HGNC (Hugo) SNORD13J
LocusID (NCBI) 109617025
Atlas_Id 79776
Location 3p21.31  [Link to chromosome band 3p21]
Location_base_pair Starts at 47250519 and ends at 47250609 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SNORD13J   52249
Cards
Entrez_Gene (NCBI)SNORD13J  109617025  small nucleolar RNA, C/D box 13J
Aliases
GeneCards (Weizmann)SNORD13J
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr3:47250519-47250609 [Contig_View]  SNORD13J [Vega]
TCGA cBioPortalSNORD13J
AceView (NCBI)SNORD13J
Genatlas (Paris)SNORD13J
WikiGenes109617025
SOURCE (Princeton)SNORD13J
Genetics Home Reference (NIH)SNORD13J
Genomic and cartography
GoldenPath hg38 (UCSC)SNORD13J  -     chr3:47250519-47250609 -  3p21.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SNORD13J  -     3p21.31   [Description]    (hg19-Feb_2009)
EnsemblSNORD13J - 3p21.31 [CytoView hg19]  SNORD13J - 3p21.31 [CytoView hg38]
Mapping of homologs : NCBISNORD13J [Mapview hg19]  SNORD13J [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SNORD13J
Gene ExpressionSNORD13J [ NCBI-GEO ]   SNORD13J [ EBI - ARRAY_EXPRESS ]   SNORD13J [ SEEK ]   SNORD13J [ MEM ]
Gene Expression Viewer (FireBrowse)SNORD13J [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)109617025
GTEX Portal (Tissue expression)SNORD13J
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORD13J
DMDM Disease mutations109617025
Blocks (Seattle)SNORD13J
Protein Interaction databases
BioGRIDSNORD13J
STRING (EMBL)SNORD13J
ZODIACSNORD13J
Ontologies - Pathways
Huge Navigator SNORD13J [HugePedia]
snp3D : Map Gene to Disease109617025
BioCentury BCIQSNORD13J
ClinGenSNORD13J
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD109617025
Clinical trialSNORD13J
Miscellaneous
canSAR (ICR)SNORD13J (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNORD13J
EVEXSNORD13J
GoPubMedSNORD13J
iHOPSNORD13J
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 14:31:42 CEST 2018

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