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SNORD140 (small nucleolar RNA, C/D box 140)

Identity

Other alias-
HGNC (Hugo) SNORD140
LocusID (NCBI) 106635682
Atlas_Id 78012
Location 22q13.2  [Link to chromosome band 22q13]
Location_base_pair Starts at 41073602 and ends at 41073721 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SNORD140   51405
Cards
Entrez_Gene (NCBI)SNORD140  106635682  small nucleolar RNA, C/D box 140
Aliases
GeneCards (Weizmann)SNORD140
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr22:41073602-41073721 [Contig_View]  SNORD140 [Vega]
TCGA cBioPortalSNORD140
AceView (NCBI)SNORD140
Genatlas (Paris)SNORD140
WikiGenes106635682
SOURCE (Princeton)SNORD140
Genetics Home Reference (NIH)SNORD140
Genomic and cartography
GoldenPath hg38 (UCSC)SNORD140  -     chr22:41073602-41073721 -  22q13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SNORD140  -     22q13.2   [Description]    (hg19-Feb_2009)
EnsemblSNORD140 - 22q13.2 [CytoView hg19]  SNORD140 - 22q13.2 [CytoView hg38]
Mapping of homologs : NCBISNORD140 [Mapview hg19]  SNORD140 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SNORD140
Gene ExpressionSNORD140 [ NCBI-GEO ]   SNORD140 [ EBI - ARRAY_EXPRESS ]   SNORD140 [ SEEK ]   SNORD140 [ MEM ]
Gene Expression Viewer (FireBrowse)SNORD140 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)106635682
GTEX Portal (Tissue expression)SNORD140
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORD140
DMDM Disease mutations106635682
Blocks (Seattle)SNORD140
Protein Interaction databases
BioGRIDSNORD140
STRING (EMBL)SNORD140
ZODIACSNORD140
Ontologies - Pathways
Huge Navigator SNORD140 [HugePedia]
snp3D : Map Gene to Disease106635682
BioCentury BCIQSNORD140
ClinGenSNORD140
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD106635682
Clinical trialSNORD140
Miscellaneous
canSAR (ICR)SNORD140 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNORD140
EVEXSNORD140
GoPubMedSNORD140
iHOPSNORD140
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:44:24 CET 2017

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