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SNORD142 (small nucleolar RNA, C/D box 142)

Identity

Alias (NCBI)SNORA85
SNORD174
ZL68
HGNC (Hugo) SNORD142
HGNC Alias symbZL68
HGNC Previous nameSNORA85
 SNORD174
HGNC Previous namesmall nucleolar RNA, H/ACA box 85
 SNORD small nucleolar RNA, C/D box 174
LocusID (NCBI) 106633806
Atlas_Id 78015
Location 10p15.2  [Link to chromosome band 10p15]
Location_base_pair Starts at 3134104 and ends at 3134298 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)SNORD142   50389
Cards
Entrez_Gene (NCBI)SNORD142    small nucleolar RNA, C/D box 142
AliasesSNORA85; SNORD174; ZL68
GeneCards (Weizmann)SNORD142
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr10:3134104-3134298 [Contig_View]  SNORD142 [Vega]
TCGA cBioPortalSNORD142
AceView (NCBI)SNORD142
Genatlas (Paris)SNORD142
SOURCE (Princeton)SNORD142
Genetics Home Reference (NIH)SNORD142
Genomic and cartography
GoldenPath hg38 (UCSC)SNORD142  -     chr10:3134104-3134298 +  10p15.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SNORD142  -     10p15.2   [Description]    (hg19-Feb_2009)
GoldenPathSNORD142 - 10p15.2 [CytoView hg19]  SNORD142 - 10p15.2 [CytoView hg38]
Genome Data Viewer NCBISNORD142 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)SNORD142
Gene ExpressionSNORD142 [ NCBI-GEO ]   SNORD142 [ EBI - ARRAY_EXPRESS ]   SNORD142 [ SEEK ]   SNORD142 [ MEM ]
Gene Expression Viewer (FireBrowse)SNORD142 [ Firebrowse - Broad ]
GenevisibleExpression of SNORD142 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)106633806
GTEX Portal (Tissue expression)SNORD142
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORD142
Protein Interaction databases
BioGRIDSNORD142
STRING (EMBL)SNORD142
ZODIACSNORD142
Ontologies - Pathways
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXSNORD142
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 16:22:58 CEST 2021

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