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SNORD146 (small nucleolar RNA, C/D box 146)

Identity

Other alias-
HGNC (Hugo) SNORD146
LocusID (NCBI) 109623484
Atlas_Id 79553
Location 3p21.31  [Link to chromosome band 3p21]
Location_base_pair Starts at 47661565 and ends at 47661694 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SNORD146   51860
Cards
Entrez_Gene (NCBI)SNORD146  109623484  small nucleolar RNA, C/D box 146
Aliases
GeneCards (Weizmann)SNORD146
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr3:47661565-47661694 [Contig_View]  SNORD146 [Vega]
TCGA cBioPortalSNORD146
AceView (NCBI)SNORD146
Genatlas (Paris)SNORD146
WikiGenes109623484
SOURCE (Princeton)SNORD146
Genetics Home Reference (NIH)SNORD146
Genomic and cartography
GoldenPath hg38 (UCSC)SNORD146  -     chr3:47661565-47661694 -  3p21.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SNORD146  -     3p21.31   [Description]    (hg19-Feb_2009)
EnsemblSNORD146 - 3p21.31 [CytoView hg19]  SNORD146 - 3p21.31 [CytoView hg38]
Mapping of homologs : NCBISNORD146 [Mapview hg19]  SNORD146 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SNORD146
Gene ExpressionSNORD146 [ NCBI-GEO ]   SNORD146 [ EBI - ARRAY_EXPRESS ]   SNORD146 [ SEEK ]   SNORD146 [ MEM ]
Gene Expression Viewer (FireBrowse)SNORD146 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)109623484
GTEX Portal (Tissue expression)SNORD146
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORD146
DMDM Disease mutations109623484
Blocks (Seattle)SNORD146
Protein Interaction databases
BioGRIDSNORD146
STRING (EMBL)SNORD146
ZODIACSNORD146
Ontologies - Pathways
Huge Navigator SNORD146 [HugePedia]
snp3D : Map Gene to Disease109623484
BioCentury BCIQSNORD146
ClinGenSNORD146
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD109623484
Clinical trialSNORD146
Miscellaneous
canSAR (ICR)SNORD146 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNORD146
EVEXSNORD146
GoPubMedSNORD146
iHOPSNORD146
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 14:31:44 CEST 2018

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