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SNORD148 (small nucleolar RNA, C/D box 148)

Identity

Other alias-
HGNC (Hugo) SNORD148
LocusID (NCBI) 109623466
Atlas_Id 79835
Location 16q11.2  [Link to chromosome band 16q11]
Location_base_pair Starts at 46886421 and ends at 46886474 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SNORD148   51862
Cards
Entrez_Gene (NCBI)SNORD148  109623466  small nucleolar RNA, C/D box 148
Aliases
GeneCards (Weizmann)SNORD148
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr16:46886421-46886474 [Contig_View]  SNORD148 [Vega]
TCGA cBioPortalSNORD148
AceView (NCBI)SNORD148
Genatlas (Paris)SNORD148
WikiGenes109623466
SOURCE (Princeton)SNORD148
Genetics Home Reference (NIH)SNORD148
Genomic and cartography
GoldenPath hg38 (UCSC)SNORD148  -     chr16:46886421-46886474 -  16q11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SNORD148  -     16q11.2   [Description]    (hg19-Feb_2009)
EnsemblSNORD148 - 16q11.2 [CytoView hg19]  SNORD148 - 16q11.2 [CytoView hg38]
Mapping of homologs : NCBISNORD148 [Mapview hg19]  SNORD148 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SNORD148
Gene ExpressionSNORD148 [ NCBI-GEO ]   SNORD148 [ EBI - ARRAY_EXPRESS ]   SNORD148 [ SEEK ]   SNORD148 [ MEM ]
Gene Expression Viewer (FireBrowse)SNORD148 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)109623466
GTEX Portal (Tissue expression)SNORD148
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORD148
DMDM Disease mutations109623466
Blocks (Seattle)SNORD148
Protein Interaction databases
BioGRIDSNORD148
STRING (EMBL)SNORD148
ZODIACSNORD148
Ontologies - Pathways
Huge Navigator SNORD148 [HugePedia]
snp3D : Map Gene to Disease109623466
BioCentury BCIQSNORD148
ClinGenSNORD148
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD109623466
Clinical trialSNORD148
Miscellaneous
canSAR (ICR)SNORD148 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNORD148
EVEXSNORD148
GoPubMedSNORD148
iHOPSNORD148
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:34:25 CET 2017

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